Id Converters Test
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Babelomics ID-Converter ENSG00000005955
ZNF403
ID Converter System ENSG00000005955
g:Profiler Gene ID Converter ENSG00000005955
ENSG00000006071
ABCC8
ENSG00000006071
ABCC8
ENSG00000006071
ENSG00000006704
GTF2IRD1
ENSG00000006704
GTF2IRD1
ENSG00000006704
ENSG00000009413
REV3L
ENSG00000009413
REV3L
ENSG00000060642
PIGV
ENSG00000060642
PIGV
ENSG00000067141
NEO1
ENSG00000067141
ENSG00000068903
SIRT2
ENSG00000069399
BCL3
ENSG00000073584
ZNF403
Clone/Gene ID Converter ENSG00000005955 ENSG00000006071
DAVID Gene ID Conversion Tool ENSG00000005955
ABCC8
ENSG00000006071
ABCC8
ENSG00000006704
GTF2IRD1
REV3L
ENSG00000009413
REV3L
PIGV
ENSG00000060642
GTF2IRD1
ENSG00000006704
ENSG00000009413
REV3L
ENSG00000009413
ENSG00000060642
PIGV
ENSG00000060642
NEO1
ENSG00000067141
NEO1
ENSG00000067141
ENSG00000068903
SIRT2
ENSG00000068903
SIRT2
ENSG00000068903
ENSG00000069399
BCL3
ENSG00000069399
BCL3
ENSG00000069399
BCL3
SMARCE1
ENSG00000073584
SMARCE1
ENSG00000073584
SMARCE1
ENSG00000073584
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000081041
CXCL2
ENSG00000081041
CXCL2
ENSG00000081041
ENSG00000083799
CYLD
ENSG00000083799
CYLD
ENSG00000083799
ENSG00000099866
MADCAM1
ENSG00000099866
MADCAM1
ENSG00000099866
ENSG00000100320
RBM9
ENSG00000100320
RBM9
ENSG00000100320
ENSG00000100644
HIF1A
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
ENSG00000100906
NFKBIA
ENSG00000100985
MMP9
ENSG00000100985
ENSG00000101017
CD40
ENSG00000101017
ENSG00000101193
C20orf11
ENSG00000104856
ENSG00000067141
NEO1
ENSG00000068903
SIRT2
ENSG00000069399
BCL3
LOC400129
ENSG00000073584
SMARCE1
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000081041
ENSG00000081041
CXCL2
ENSG00000083799
ENSG00000083799
CYLD
ENSG00000099866
ENSG00000099866
MADCAM1
ENSG00000100320
RBM9
RBM9
ENSG00000100320
RBM9
ENSG00000100644
HIF1A
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
ENSG00000100906
MMP9
ENSG00000100985
MMP9
ENSG00000100985
CD40
ENSG00000101017
CD40
ENSG00000101017
ENSG00000101193
C20orf11
ENSG00000101193
C20ORF11
RELB
ENSG00000104856
RELB
ENSG00000104951
NUP62
ENSG00000104951
IL4I1
ENSG00000105287
PRKD2
ENSG00000105287
PRKD2
ENSG00000105287
ENSG00000107968
MAP3K8
ENSG00000107968
MAP3K8
ENSG00000107968
MAP3K8
ENSG00000108342
CSF3
ENSG00000108342
CSF3
ENSG00000108342
CSF3
ENSG00000108342
ENSG00000108511
HOXB6
ENSG00000108511
HOXB6
ENSG00000108511
ENSG00000108511
ENSG00000110011
DNAJC4
ENSG00000110011
DNAJC4
ENSG00000110011
ENSG00000110011
ENSG00000110944
IL23A
ENSG00000110944
IL23A
ENSG00000110944
ENSG00000110944
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
MMP9
ENSG00000100985
MMP9
CD40
ENSG00000101017
CD40
ENSG00000101193
C20orf11
ENSG00000101193
C20ORF11
ENSG00000104856
ENSG00000104856
RELB
ENSG00000104856
RELB
ENSG00000104951
ENSG00000104951 ENSG00000105287
ENSG00000104951 PRKD2
ENSG00000105287
PRKD2
ENSG00000107968
MAP3K8
CSF3
ENSG00000108342
CSF3
HOXB6
ENSG00000108511
HOXB6
ENSG00000110011
DNAJC4
ENSG00000107968
IL23A
ENSG00000110944
ENSG00000112297
AIM1
ENSG00000112297
AIM1
ENSG00000112297
AIM1
ENSG00000112297
ENSG00000112297
ENSG00000112493
TAPBP
ENSG00000112493
TAPBP
ENSG00000112493
TAPBP
ENSG00000112493
ENSG00000112493
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118503
TNFAIP3
ENSG00000118503
TNFAIP3
ENSG00000118503
TNFAIP3
ENSG00000118503
ENSG00000118503
TNFAIP3
ENSG00000121104
FAM117A
ENSG00000121104
FAM117A
ENSG00000121104
ENSG00000123728
RAP2C
ENSG00000123728
RAP2C
ENSG00000123728
ENSG00000124875
CXCL6
ENSG00000124875
CXCL6
ENSG00000124875
ENSG00000125686
PPARBP
ENSG00000125686
ENSG00000125686
PPARBP
ENSG00000125686
ENSG00000121104
FAM117A
ENSG00000121104
RAP2C
ENSG00000123728
RAP2C
ENSG00000123728
CXCL6
ENSG00000124875
CXCL6
ENSG00000124875 ENSG00000125686
AIM1
RAP2C
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125944
HNRPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000126458
RRAS
ENSG00000126458
RRAS
ENSG00000126458
ENSG00000126458
RRAS
ENSG00000129993
CBFA2T3
ENSG00000129993
CBFA2T3
ENSG00000129993
ENSG00000126458 CBFA2T3
ENSG00000129993
ENSG00000130066
SAT1
ENSG00000130066
SAT1
ENSG00000130066
SAT1
ENSG00000130066
ENSG00000131196
NFATC1
ENSG00000131196
NFATC1
ENSG00000131196
NFATC1
ENSG00000131196
ENSG00000131748
STARD3
ENSG00000131748
STARD3
ENSG00000131748
STARD3
ENSG00000131748
CBFA2T3
ENSG00000129993 ENSG00000130066
NFATC1
SAT1
ENSG00000131196 ENSG00000131748
ENSG00000132965
ALOX5AP
ENSG00000132965
ALOX5AP
ENSG00000132965
ALOX5AP
ENSG00000132965
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
ENSG00000132965
ENSG00000133401
PDZD2
ENSG00000133401
PDZD2
ENSG00000133401
ENSG00000133401
PDZD2
ENSG00000133401
PDZD2
ENSG00000135090
TAOK3
ENSG00000135090
TAOK3
ENSG00000135090
ENSG00000135090
TAOK3
ENSG00000135090
TAOK3
ENSG00000135373
EHF
ENSG00000135373
EHF
ENSG00000135373
ENSG00000135373
CHI3L1
ENSG00000135373
ENSG00000135447
PPP1R1A
ENSG00000135447
PPP1R1A
ENSG00000135447
ENSG00000135447
NA
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000139613
SMARCC2
ENSG00000139613
SMARCC2
ENSG00000139613
ENSG00000139613
SMARCC2
ENSG00000139613
SMARCC2
ENSG00000140968
IRF8
ENSG00000140968
IRF8
ENSG00000140968
ENSG00000140968
IRF8
ENSG00000140968
IRF8
ENSG00000141736
ERBB2
ENSG00000141736
ERBB2
ENSG00000141736
ENSG00000141736
ERBB2
ENSG00000141736
ERBB2
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000145901
TNIP1
ENSG00000145901
TNIP1
ENSG00000145901
ENSG00000145901
TNIP1
ENSG00000146834
BCDIN3
ENSG00000146834
MEPCE
ENSG00000148123 ENSG00000150403
ENSG00000148123
ENSG00000135447
IRF8
ENSG00000145901 ENSG00000146834
MEPCE
ENSG00000146834
ENSG00000148123
ENSG00000146834 PPAPR3
ENSG00000148123
RP11-35N6.1
ENSG00000148123
TMCO3
ENSG00000150403
RP11-35N6.1
TMCO3
ENSG00000150403
TMCO3
ENSG00000150403
TMCO3
ENSG00000150403
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000157500
APPL1
ENSG00000157500
ENSG00000157500
APPL
ENSG00000157500
APPL1
ENSG00000157500
APPL1
ENSG00000161570
CCL5
ENSG00000161570
CCL5
ENSG00000161570
CCL5
ENSG00000161570
ENSG00000161570
CCL5
ENSG00000161638
ITGA5
ENSG00000161638
ITGA5
ENSG00000161638
ENSG00000162692
VCAM1
ENSG00000162692
VCAM1
ENSG00000162692
VCAM1
ENSG00000162692
ENSG00000162924
REL
ENSG00000162924
REL
ENSG00000162924
REL
ENSG00000162924
ENSG00000163719
MTMR14
ENSG00000163719
MTMR14
ENSG00000163719
ENSG00000163719
ENSG00000163734
CXCL3
ENSG00000163734
CXCL3
ENSG00000163734
ENSG00000163734
ENSG00000163735
CXCL5
ENSG00000163735
CXCL5
ENSG00000163735
ENSG00000163932
PRKCD
ENSG00000163932
PRKCD
ENSG00000163932
ENSG00000164104
HMGB2
ENSG00000164104
HMGB2
ENSG00000165458
INPPL1
ENSG00000165458
INPPL1
ENSG00000165698
C9orf9
ENSG00000165698
C9orf9
ENSG00000165698
ENSG00000161638
ITGA5 REL CXCL3
ENSG00000163735
ENSG00000161638
ITGA5
ENSG00000162692
VCAM1
ENSG00000162924
REL
ENSG00000163719
MTMR14
ENSG00000163734
CXCL3
ENSG00000163735
CXCL5
ENSG00000163932
PRKCD
ENSG00000163932
PRKCD
ENSG00000164104
ENSG00000164104
HMGB2
ENSG00000164104
HMGB2
ENSG00000165458
ENSG00000165458
INPPL1
ENSG00000165458
PRKCD
C9ORF9
ENSG00000165698
ENSG00000165801
ENSG00000165801
ENSG00000165801
FLJ10357
ENSG00000166285
ENSG00000166285
ENSG00000166285
CFB
ENSG00000166285
ENSG00000166285
CFB
ENSG00000166396
SERPINB7
ENSG00000166396
ENSG00000166396
SERPINB7
SERPINB7
ENSG00000166396
SERPINB7
FLJ10357
C9ORF9
ENSG00000165801 ENSG00000166396
ENSG00000165801
ENSG00000165698
ENSG00000166710
B2M
ENSG00000166710
B2M
ENSG00000166710
B2M
ENSG00000166710
ENSG00000166710
B2M
ENSG00000166949
SMAD3
ENSG00000166949
SMAD3
ENSG00000166949
SMAD3
ENSG00000166949
ENSG00000166949
SMAD3
ENSG00000169245
CXCL10
ENSG00000169245
CXCL10
ENSG00000169245
ENSG00000171700
RGS19
ENSG00000171700
RGS19
ENSG00000171700
ENSG00000172602
RND1
ENSG00000172602
RND1
ENSG00000172602
ENSG00000172602
ENSG00000172602
RND1
ENSG00000173540
GMPPB
ENSG00000173540
GMPPB
ENSG00000173540
ENSG00000173540
ENSG00000173540
BBS1
ENSG00000174483
BBS1
ENSG00000174483
BBS1
ENSG00000174483
ENSG00000174483
ENSG00000174483
BBS1
ENSG00000178834
ENSG00000178834
ENSG00000178834
ENSG00000184009
ACTG1
ENSG00000184009
ACTG1
ENSG00000184009
ENSG00000184009
ENSG00000184009
ENSG00000184156
KCNQ3
ENSG00000184156
KCNQ3
ENSG00000184156
KCNQ3
ENSG00000184156
ENSG00000184156
KCNQ3
ENSG00000184371
CSF1
ENSG00000184371
CSF1
ENSG00000184371
CSF1
ENSG00000184371
ENSG00000184371
CSF1
ENSG00000196306
HLA-H
ENSG00000196306
ENSG00000196306
HLA-H
ENSG00000178834
ENSG00000178834
ENSG00000196306
RGS19
ENSG00000169245
CXCL10
ENSG00000169245
ENSG00000171700
RGS19
ENSG00000171700
DPP3
CSF1
ENSG00000196306 SIAH1
RGS19
ACTB
ENSG00000196470
SIAH1
ENSG00000196470
SIAH1
ENSG00000196470
ENSG00000196470
ENSG00000196470
SIAH1
ENSG00000196954
CASP4
ENSG00000196954
CASP4
ENSG00000196954
ENSG00000196954
ENSG00000196954
CASP4
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198638
ENSG00000198638
ENSG00000198638
ENSG00000198638
ENSG00000198638
A list of 100 Ensembl Human Gene IDs was extracted from a supplementary file of a published paper (PMID:17302974). These 100 Ensembl IDs were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools. Genes in green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/17302974 http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1810323&blobname=1471-2105-8-55-S6.xls
100
91 90
89 78
80 70
61 60
57
50 40
32
30 20 10 0 1
2
3
4
Conversion from Ensembl IDs to HGNC symbols. Y axis: Number of retrieved HGNC symbols
1: Babelomics ID-Converter 2: ID Converter System 3: DAVID Gene ID Conversion Tool 4: g:Profiler Gene ID Converter 5: Clone/Gene ID Converter 6: Retrieved by all five tools
5
6
Babelomics ID-Converter 200724_at
RPL10
g:Profiler Gene ID Converter 200724_at
RPL10 MYH11
201495_x_at
MYH11
201495_x_at
202493_x_at
CSH2
202493_x_at
202755_s_at
202755_s_at
Clone/Gene ID Converter 200724_at
GPC1
200724_at
CSH2
202755_s_at
201495_x_at 202493_x_at 202755_s_at 204217_s_at
DAVID Gene ID Conversion Tool
DNASE1L1
RTN2
MatchMiner
RPL10
200724_at
RPL10
201495_x_at
MYH11
201495_x_at
MYH11
202493_x_at
GH1
202493_x_at
GH2
GPC1
202755_s_at
GPC1
204217_s_at
RTN2
204217_s_at
RTN2
204450_x_at
APOA1
204450_x_at
APOA1 MYH7
204217_s_at
RTN2
204217_s_at
204450_x_at
APOA1
204450_x_at
APOA1
204450_x_at
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
204989_s_at
ITGB4
204989_s_at
204989_s_at
ITGB4
204989_s_at
ITGB4
204989_s_at
ITGB4
205195_at
AP1S1
205195_at
205195_at
AP1S1
205195_at
AP1S1
205195_at
AP1S1
205574_x_at
BMP1
205574_x_at
BMP1
205574_x_at
205574_x_at
BMP1
205574_x_at
BMP1
205753_at
CRP
205753_at
CRP
205753_at
CRP
205753_at
CRP
205753_at
CRP
205900_at
KRT1
205900_at
205900_at
KRT1
205900_at
KRT1
205900_at
KRT1
205958_x_at
CSH2
205958_x_at
205958_x_at
CSH2
205958_x_at
CSHL1
205958_x_at
CSHL1
206087_x_at
HFE
206087_x_at
CSHL1
206087_x_at
206168_at
HFE
206168_at
ZC3H7B
206168_at
206087_x_at
HFE
206087_x_at
HFE
206168_at
ZC3H7B
206168_at
206261_at
ZNF239
206261_at
ZNF239
206261_at
ZC3H7B
ZNF239
206261_at
ZNF239
206261_at
206329_at
EXTL1
206329_at
EXTL1
ZNF239
206329_at
EXTL1
206329_at
EXTL1
206329_at
EXTL1
206442_at
SEMG1
206442_at
206628_at
SLC5A1
206628_at
SEMG1
206442_at
SEMG1
206442_at
SEMG1
206442_at
SEMG1
SLC5A1
206628_at
SLC5A1
206628_at
SLC5A1
206628_at
206639_x_at
HTN1
SLC5A1
206639_x_at
HTN1
206639_x_at
206639_x_at
HTN1
206639_x_at
HTN1
206742_at 206775_at
FIGF
206742_at
FIGF
206742_at
FIGF
206742_at
FIGF
206742_at
FIGF
CUBN
206775_at
CUBN
206775_at
CUBN
206775_at
CUBN
206775_at
CUBN
206831_s_at
ARSD
206831_s_at
ARSD
206831_s_at
ARSD
ARSD
206858_s_at
HOXC6
206858_s_at
206859_s_at
PAEP
206859_s_at
PAEP
206859_s_at
206997_s_at
HS6ST1
206997_s_at
HS6ST1
207020_at
HSF2BP
207020_at
HSF2BP
207028_at
MYCNOS
207028_at
207139_at
ATP4A
207139_at
207188_at
CDK3
207188_at
206831_s_at
ARSD
206831_s_at
206858_s_at
HOXC6
206858_s_at
HOXC4
PAEP
206859_s_at
PAEP
206859_s_at
PAEP
206997_s_at
HS6ST1
206997_s_at
HS6ST1
206997_s_at
HS6ST1
207020_at
HSF2BP
207020_at
HSF2BP
207020_at
HSF2BP
207028_at
MYCNOS
207028_at
MYCNOS
207139_at
ATP4A
207139_at
ATP4A
207188_at
CDK3
207188_at
CDK3
206858_s_at
207028_at ATP4A
207139_at
ATP4A
207188_at
207347_at
PGBD3
207347_at
ERCC6
207347_at
PGBD3
207347_at
PGBD3
207347_at
ERCC6
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207665_at
ADAM21
207665_at
207665_at
ADAM21
207665_at
ADAM21
207665_at
ADAM21P
207824_s_at
MAZ
207824_s_at
MAZ
207824_s_at
MAZ
207824_s_at
MAZ
207967_at
VPS45
207967_at
VPS45 IL1RL2
207967_at
207824_s_at 207967_at
VPS45
207967_at
IL1RL2
208038_at
IL1RL2
208038_at
IL1RL2
208038_at
208226_x_at
ADAM22
208226_x_at
ADAM22
208226_x_at
ADAM22
208243_s_at
CNR1
208243_s_at
CNR1 RRH
208038_at
IL1RL2
208038_at
208226_x_at
ADAM22
208226_x_at
208243_s_at
CNR1
208243_s_at
CNR1
208243_s_at
208314_at
RRH
208314_at
RRH
208314_at
RRH
208314_at
RRH
208314_at
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208379_x_at
NPY2R
208379_x_at
NPY2R
208379_x_at
208379_x_at
208379_x_at
208391_s_at
GLP1R
208408_at
208391_s_at
GLP1R
208408_at
209742_s_at
MYL2
209742_s_at
209789_at
CORO2B
209789_at
209904_at
TNNC1
208391_s_at
GLP1R
208391_s_at
GLP1R
208408_at
208391_s_at
GLP1R
208408_at
PTN
208408_at
PTN
209742_s_at
209742_s_at
MYL2
209742_s_at
MYL2
CORO2B
209789_at
209789_at
CORO2B
209789_at
CORO2B
209904_at
TNNC1
209904_at
TNNC1
209951_s_at
MAP2K7
209951_s_at
MAP2K7
209951_s_at
MAP2K7
209951_s_at
MAP2K7
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210393_at
LGR5
210393_at
210393_at
LGR5
210393_at
LGR5
210581_x_at
PATZ1
210581_x_at
PATZ1
210581_x_at
210581_x_at
PATZ1
210581_x_at
PATZ1
210701_at
CFDP1
210701_at
210701_at
CFDP1
210701_at
CFDP1
209951_s_at 210333_at
210701_at
209904_at
209904_at
210393_at PATZ1
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211708_s_at
SCD
211708_s_at
SCD
211708_s_at
LOC645313
211708_s_at
SCD
211708_s_at
SCD
211739_x_at
CSH2
211739_x_at
CSH2
211739_x_at
211958_at
IGFBP5
211958_at
212992_at
C14orf78
212992_at
212992_at
213231_at
DMWD
213231_at
213231_at
213449_at
POP1
213449_at
213884_s_at
TRIM3
213884_s_at
TRIM3
214158_s_at
PRDM10
214158_s_at
FABP1
214158_s_at
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214421_x_at
CYP2C9
214421_x_at
CYP2C9
IGFBP5
211739_x_at
GH1
211739_x_at
GH2
211958_at
IGFBP5
211958_at
IGFBP5
AHNAK2
212992_at
AHNAK2
212992_at
AHNAK2
DMWD
213231_at
DMWD
213231_at
DMWD
213449_at
213449_at
POP1
213449_at
POP1
213884_s_at
213884_s_at
TRIM3
213884_s_at
TRIM3
PRDM10
214158_s_at
PRDM10
214158_s_at
PRDM10
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214421_x_at
CYP2C19
214421_x_at
CYP2C9
214421_x_at
CYP2C9
211958_at
215012_at
215012_at
215012_at
215012_at
ZNF451
215012_at
KIAA1586
215403_at
215403_at
215403_at
215403_at
TRIO
215403_at
TRIO
215651_at
215651_at
215651_at
215651_at
SNF1LK2
215651_at
215692_s_at
215692_s_at
215692_s_at
215692_s_at
MPPED2
215692_s_at
MPPED2
215828_at
215828_at
215828_at
215828_at
ZFHX3
215828_at
ATBF1
216284_at
216284_at
216284_at
216284_at
CDC14B
216284_at
216721_at
216721_at
216721_at
216721_at
SLC25A30
216721_at
SLC25A30
216934_at
216934_at
216934_at
CLTB
217082_at
217082_at
217082_at
216934_at
MPPED2
CLTB
217082_at
217293_at ZHX3
217367_s_at
217447_at
217447_at
217567_at
217567_at
218685_s_at
CLTB
217082_at
217293_at 217367_s_at
216934_at
SMUG1
219153_s_at
217293_at ZHX3 TGM4
218685_s_at 219153_s_at
219249_s_at
FKBP10
219249_s_at
219531_at
CEP72
219531_at
219685_at
TMEM35
219685_at
219769_at
INCENP
219769_at
MPPED2
217367_s_at
TMEM35
217293_at
217367_s_at
ZHX3
217367_s_at
ZHX3
217447_at
217447_at
MAG
217447_at
MAG
217567_at
217567_at
TGM4
217567_at
TGM4
218685_s_at
218685_s_at
SMUG1
218685_s_at
SMUG1
219153_s_at FKBP10
217293_at ZHX3
THSD4
219249_s_at
219153_s_at
THSD4
219153_s_at
THSD4
219249_s_at
FKBP10
219249_s_at
FKBP10 CEP72
219531_at
CEP72
219531_at
CEP72
219531_at
219685_at
TMEM35
219685_at
TMEM35
219685_at
TMEM35
219769_at
INCENP
219769_at
INCENP
219769_at
INCENP
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220366_at
ELSPBP1
220366_at
220366_at
ELSPBP1
220505_at
C9orf53
220505_at
220505_at
220366_at
ELSPBP1
220505_at
CDKN2A FAM90A1
FAM90A1
220535_at
220535_at
FAM90A1
220535_at
220555_s_at
PDZD7
220555_s_at
220555_s_at
PDZD7
220555_s_at
PDZD7
220555_s_at
PDZD7
220645_at
FAM55D
220645_at
220645_at
FAM55D
220645_at
FAM55D
220645_at
FAM55D
220694_at
220694_at
220694_at
DDEF1IT1
220694_at
DDEF1IT1
221113_s_at
221113_s_at
221113_s_at
WNT16
221113_s_at
WNT16
221116_at
221116_at
221113_s_at
WNT16
221116_at 221917_s_at
221917_s_at
221948_s_at
221948_s_at
222025_s_at
OPLAH
220535_at
ELSPBP1 C9ORF53
220535_at
220694_at
FAM90A23
220366_at 220505_at
221917_s_at KLHL22
WNT16
221116_at GRSF1
221948_s_at
221917_s_at
GRSF1
221917_s_at
GRSF1
221948_s_at
KLHL22
221948_s_at
KLHL22 OPLAH
222025_s_at
222025_s_at
222025_s_at
OPLAH
222025_s_at
222167_at
222167_at
222167_at
222167_at
PVRL3
222167_at
PVRL3
222371_at
222371_at
222371_at
222371_at
PIAS1
222371_at
PIAS1
40273_at
40273_at
SPHK2
40273_at
DBP
91816_f_at
91816_f_at
MEX3D
91816_f_at
RKHD1
40273_at
SPHK2
40273_at
91816_f_at
RKHD1
91816_f_at
MEX3D
OPLAH
221116_at
A list of 100 Affymetrix IDs was extracted from a supplementary file of a published paper (PMID:16638148). These 100 Affymetrix IDs related to human genes were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools. Genes in green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/16638148 http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1553448&blobname=1471-2164-7-92-S4.xls
100
96
95
90
77
80 70
57
60
52
50 40
28
30 20 10 0 1
2
3
4
5
Conversion from Affymetrix IDs to HGNC symbols. Y axis: Number of retrieved HGNC symbols
1: DAVID Gene ID Conversion Tool 2: MatchMiner 3: Babelomics ID-Converter 4: Clone/Gene ID Converter 5: g:Profiler Gene ID Converter 6: Retrieved by all five tools Diego Forero, MD Editor, hum-molgen.org http://hum-molgen.org/
6
ZNF403
ID Converter System ENSG00000005955
g:Profiler Gene ID Converter ENSG00000005955
ENSG00000006071
ABCC8
ENSG00000006071
ABCC8
ENSG00000006071
ENSG00000006704
GTF2IRD1
ENSG00000006704
GTF2IRD1
ENSG00000006704
ENSG00000009413
REV3L
ENSG00000009413
REV3L
ENSG00000060642
PIGV
ENSG00000060642
PIGV
ENSG00000067141
NEO1
ENSG00000067141
ENSG00000068903
SIRT2
ENSG00000069399
BCL3
ENSG00000073584
ZNF403
Clone/Gene ID Converter ENSG00000005955 ENSG00000006071
DAVID Gene ID Conversion Tool ENSG00000005955
ABCC8
ENSG00000006071
ABCC8
ENSG00000006704
GTF2IRD1
REV3L
ENSG00000009413
REV3L
PIGV
ENSG00000060642
GTF2IRD1
ENSG00000006704
ENSG00000009413
REV3L
ENSG00000009413
ENSG00000060642
PIGV
ENSG00000060642
NEO1
ENSG00000067141
NEO1
ENSG00000067141
ENSG00000068903
SIRT2
ENSG00000068903
SIRT2
ENSG00000068903
ENSG00000069399
BCL3
ENSG00000069399
BCL3
ENSG00000069399
BCL3
SMARCE1
ENSG00000073584
SMARCE1
ENSG00000073584
SMARCE1
ENSG00000073584
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000081041
CXCL2
ENSG00000081041
CXCL2
ENSG00000081041
ENSG00000083799
CYLD
ENSG00000083799
CYLD
ENSG00000083799
ENSG00000099866
MADCAM1
ENSG00000099866
MADCAM1
ENSG00000099866
ENSG00000100320
RBM9
ENSG00000100320
RBM9
ENSG00000100320
ENSG00000100644
HIF1A
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
ENSG00000100906
NFKBIA
ENSG00000100985
MMP9
ENSG00000100985
ENSG00000101017
CD40
ENSG00000101017
ENSG00000101193
C20orf11
ENSG00000104856
ENSG00000067141
NEO1
ENSG00000068903
SIRT2
ENSG00000069399
BCL3
LOC400129
ENSG00000073584
SMARCE1
ENSG00000073756
PTGS2
ENSG00000073756
PTGS2
ENSG00000077150
NFKB2
ENSG00000077150
NFKB2
ENSG00000081041
ENSG00000081041
CXCL2
ENSG00000083799
ENSG00000083799
CYLD
ENSG00000099866
ENSG00000099866
MADCAM1
ENSG00000100320
RBM9
RBM9
ENSG00000100320
RBM9
ENSG00000100644
HIF1A
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
ENSG00000100906
MMP9
ENSG00000100985
MMP9
ENSG00000100985
CD40
ENSG00000101017
CD40
ENSG00000101017
ENSG00000101193
C20orf11
ENSG00000101193
C20ORF11
RELB
ENSG00000104856
RELB
ENSG00000104951
NUP62
ENSG00000104951
IL4I1
ENSG00000105287
PRKD2
ENSG00000105287
PRKD2
ENSG00000105287
ENSG00000107968
MAP3K8
ENSG00000107968
MAP3K8
ENSG00000107968
MAP3K8
ENSG00000108342
CSF3
ENSG00000108342
CSF3
ENSG00000108342
CSF3
ENSG00000108342
ENSG00000108511
HOXB6
ENSG00000108511
HOXB6
ENSG00000108511
ENSG00000108511
ENSG00000110011
DNAJC4
ENSG00000110011
DNAJC4
ENSG00000110011
ENSG00000110011
ENSG00000110944
IL23A
ENSG00000110944
IL23A
ENSG00000110944
ENSG00000110944
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000111956
ENSG00000100644
HIF1A
ENSG00000100906
NFKBIA
MMP9
ENSG00000100985
MMP9
CD40
ENSG00000101017
CD40
ENSG00000101193
C20orf11
ENSG00000101193
C20ORF11
ENSG00000104856
ENSG00000104856
RELB
ENSG00000104856
RELB
ENSG00000104951
ENSG00000104951 ENSG00000105287
ENSG00000104951 PRKD2
ENSG00000105287
PRKD2
ENSG00000107968
MAP3K8
CSF3
ENSG00000108342
CSF3
HOXB6
ENSG00000108511
HOXB6
ENSG00000110011
DNAJC4
ENSG00000107968
IL23A
ENSG00000110944
ENSG00000112297
AIM1
ENSG00000112297
AIM1
ENSG00000112297
AIM1
ENSG00000112297
ENSG00000112297
ENSG00000112493
TAPBP
ENSG00000112493
TAPBP
ENSG00000112493
TAPBP
ENSG00000112493
ENSG00000112493
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000114270
COL7A1
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000115866
DARS
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116337
AMPD2
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000116406
EDEM3
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118260
CREB1
ENSG00000118503
TNFAIP3
ENSG00000118503
TNFAIP3
ENSG00000118503
TNFAIP3
ENSG00000118503
ENSG00000118503
TNFAIP3
ENSG00000121104
FAM117A
ENSG00000121104
FAM117A
ENSG00000121104
ENSG00000123728
RAP2C
ENSG00000123728
RAP2C
ENSG00000123728
ENSG00000124875
CXCL6
ENSG00000124875
CXCL6
ENSG00000124875
ENSG00000125686
PPARBP
ENSG00000125686
ENSG00000125686
PPARBP
ENSG00000125686
ENSG00000121104
FAM117A
ENSG00000121104
RAP2C
ENSG00000123728
RAP2C
ENSG00000123728
CXCL6
ENSG00000124875
CXCL6
ENSG00000124875 ENSG00000125686
AIM1
RAP2C
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125851
PCSK2
ENSG00000125944
HNRPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000125944
HNRNPR
ENSG00000126458
RRAS
ENSG00000126458
RRAS
ENSG00000126458
ENSG00000126458
RRAS
ENSG00000129993
CBFA2T3
ENSG00000129993
CBFA2T3
ENSG00000129993
ENSG00000126458 CBFA2T3
ENSG00000129993
ENSG00000130066
SAT1
ENSG00000130066
SAT1
ENSG00000130066
SAT1
ENSG00000130066
ENSG00000131196
NFATC1
ENSG00000131196
NFATC1
ENSG00000131196
NFATC1
ENSG00000131196
ENSG00000131748
STARD3
ENSG00000131748
STARD3
ENSG00000131748
STARD3
ENSG00000131748
CBFA2T3
ENSG00000129993 ENSG00000130066
NFATC1
SAT1
ENSG00000131196 ENSG00000131748
ENSG00000132965
ALOX5AP
ENSG00000132965
ALOX5AP
ENSG00000132965
ALOX5AP
ENSG00000132965
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
CHI3L1
ENSG00000133048
ENSG00000132965
ENSG00000133401
PDZD2
ENSG00000133401
PDZD2
ENSG00000133401
ENSG00000133401
PDZD2
ENSG00000133401
PDZD2
ENSG00000135090
TAOK3
ENSG00000135090
TAOK3
ENSG00000135090
ENSG00000135090
TAOK3
ENSG00000135090
TAOK3
ENSG00000135373
EHF
ENSG00000135373
EHF
ENSG00000135373
ENSG00000135373
CHI3L1
ENSG00000135373
ENSG00000135447
PPP1R1A
ENSG00000135447
PPP1R1A
ENSG00000135447
ENSG00000135447
NA
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000135845
PIGC
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000136688
IL1F9
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137076
TLN1
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000137364
TPMT
ENSG00000139613
SMARCC2
ENSG00000139613
SMARCC2
ENSG00000139613
ENSG00000139613
SMARCC2
ENSG00000139613
SMARCC2
ENSG00000140968
IRF8
ENSG00000140968
IRF8
ENSG00000140968
ENSG00000140968
IRF8
ENSG00000140968
IRF8
ENSG00000141736
ERBB2
ENSG00000141736
ERBB2
ENSG00000141736
ENSG00000141736
ERBB2
ENSG00000141736
ERBB2
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000143466
IKBKE
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000144566
RAB5A
ENSG00000145901
TNIP1
ENSG00000145901
TNIP1
ENSG00000145901
ENSG00000145901
TNIP1
ENSG00000146834
BCDIN3
ENSG00000146834
MEPCE
ENSG00000148123 ENSG00000150403
ENSG00000148123
ENSG00000135447
IRF8
ENSG00000145901 ENSG00000146834
MEPCE
ENSG00000146834
ENSG00000148123
ENSG00000146834 PPAPR3
ENSG00000148123
RP11-35N6.1
ENSG00000148123
TMCO3
ENSG00000150403
RP11-35N6.1
TMCO3
ENSG00000150403
TMCO3
ENSG00000150403
TMCO3
ENSG00000150403
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000155366
RHOC
ENSG00000157500
APPL1
ENSG00000157500
ENSG00000157500
APPL
ENSG00000157500
APPL1
ENSG00000157500
APPL1
ENSG00000161570
CCL5
ENSG00000161570
CCL5
ENSG00000161570
CCL5
ENSG00000161570
ENSG00000161570
CCL5
ENSG00000161638
ITGA5
ENSG00000161638
ITGA5
ENSG00000161638
ENSG00000162692
VCAM1
ENSG00000162692
VCAM1
ENSG00000162692
VCAM1
ENSG00000162692
ENSG00000162924
REL
ENSG00000162924
REL
ENSG00000162924
REL
ENSG00000162924
ENSG00000163719
MTMR14
ENSG00000163719
MTMR14
ENSG00000163719
ENSG00000163719
ENSG00000163734
CXCL3
ENSG00000163734
CXCL3
ENSG00000163734
ENSG00000163734
ENSG00000163735
CXCL5
ENSG00000163735
CXCL5
ENSG00000163735
ENSG00000163932
PRKCD
ENSG00000163932
PRKCD
ENSG00000163932
ENSG00000164104
HMGB2
ENSG00000164104
HMGB2
ENSG00000165458
INPPL1
ENSG00000165458
INPPL1
ENSG00000165698
C9orf9
ENSG00000165698
C9orf9
ENSG00000165698
ENSG00000161638
ITGA5 REL CXCL3
ENSG00000163735
ENSG00000161638
ITGA5
ENSG00000162692
VCAM1
ENSG00000162924
REL
ENSG00000163719
MTMR14
ENSG00000163734
CXCL3
ENSG00000163735
CXCL5
ENSG00000163932
PRKCD
ENSG00000163932
PRKCD
ENSG00000164104
ENSG00000164104
HMGB2
ENSG00000164104
HMGB2
ENSG00000165458
ENSG00000165458
INPPL1
ENSG00000165458
PRKCD
C9ORF9
ENSG00000165698
ENSG00000165801
ENSG00000165801
ENSG00000165801
FLJ10357
ENSG00000166285
ENSG00000166285
ENSG00000166285
CFB
ENSG00000166285
ENSG00000166285
CFB
ENSG00000166396
SERPINB7
ENSG00000166396
ENSG00000166396
SERPINB7
SERPINB7
ENSG00000166396
SERPINB7
FLJ10357
C9ORF9
ENSG00000165801 ENSG00000166396
ENSG00000165801
ENSG00000165698
ENSG00000166710
B2M
ENSG00000166710
B2M
ENSG00000166710
B2M
ENSG00000166710
ENSG00000166710
B2M
ENSG00000166949
SMAD3
ENSG00000166949
SMAD3
ENSG00000166949
SMAD3
ENSG00000166949
ENSG00000166949
SMAD3
ENSG00000169245
CXCL10
ENSG00000169245
CXCL10
ENSG00000169245
ENSG00000171700
RGS19
ENSG00000171700
RGS19
ENSG00000171700
ENSG00000172602
RND1
ENSG00000172602
RND1
ENSG00000172602
ENSG00000172602
ENSG00000172602
RND1
ENSG00000173540
GMPPB
ENSG00000173540
GMPPB
ENSG00000173540
ENSG00000173540
ENSG00000173540
BBS1
ENSG00000174483
BBS1
ENSG00000174483
BBS1
ENSG00000174483
ENSG00000174483
ENSG00000174483
BBS1
ENSG00000178834
ENSG00000178834
ENSG00000178834
ENSG00000184009
ACTG1
ENSG00000184009
ACTG1
ENSG00000184009
ENSG00000184009
ENSG00000184009
ENSG00000184156
KCNQ3
ENSG00000184156
KCNQ3
ENSG00000184156
KCNQ3
ENSG00000184156
ENSG00000184156
KCNQ3
ENSG00000184371
CSF1
ENSG00000184371
CSF1
ENSG00000184371
CSF1
ENSG00000184371
ENSG00000184371
CSF1
ENSG00000196306
HLA-H
ENSG00000196306
ENSG00000196306
HLA-H
ENSG00000178834
ENSG00000178834
ENSG00000196306
RGS19
ENSG00000169245
CXCL10
ENSG00000169245
ENSG00000171700
RGS19
ENSG00000171700
DPP3
CSF1
ENSG00000196306 SIAH1
RGS19
ACTB
ENSG00000196470
SIAH1
ENSG00000196470
SIAH1
ENSG00000196470
ENSG00000196470
ENSG00000196470
SIAH1
ENSG00000196954
CASP4
ENSG00000196954
CASP4
ENSG00000196954
ENSG00000196954
ENSG00000196954
CASP4
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000197499
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198479
ENSG00000198638
ENSG00000198638
ENSG00000198638
ENSG00000198638
ENSG00000198638
A list of 100 Ensembl Human Gene IDs was extracted from a supplementary file of a published paper (PMID:17302974). These 100 Ensembl IDs were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools. Genes in green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/17302974 http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1810323&blobname=1471-2105-8-55-S6.xls
100
91 90
89 78
80 70
61 60
57
50 40
32
30 20 10 0 1
2
3
4
Conversion from Ensembl IDs to HGNC symbols. Y axis: Number of retrieved HGNC symbols
1: Babelomics ID-Converter 2: ID Converter System 3: DAVID Gene ID Conversion Tool 4: g:Profiler Gene ID Converter 5: Clone/Gene ID Converter 6: Retrieved by all five tools
5
6
Babelomics ID-Converter 200724_at
RPL10
g:Profiler Gene ID Converter 200724_at
RPL10 MYH11
201495_x_at
MYH11
201495_x_at
202493_x_at
CSH2
202493_x_at
202755_s_at
202755_s_at
Clone/Gene ID Converter 200724_at
GPC1
200724_at
CSH2
202755_s_at
201495_x_at 202493_x_at 202755_s_at 204217_s_at
DAVID Gene ID Conversion Tool
DNASE1L1
RTN2
MatchMiner
RPL10
200724_at
RPL10
201495_x_at
MYH11
201495_x_at
MYH11
202493_x_at
GH1
202493_x_at
GH2
GPC1
202755_s_at
GPC1
204217_s_at
RTN2
204217_s_at
RTN2
204450_x_at
APOA1
204450_x_at
APOA1 MYH7
204217_s_at
RTN2
204217_s_at
204450_x_at
APOA1
204450_x_at
APOA1
204450_x_at
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
MYH7
204737_s_at
204989_s_at
ITGB4
204989_s_at
204989_s_at
ITGB4
204989_s_at
ITGB4
204989_s_at
ITGB4
205195_at
AP1S1
205195_at
205195_at
AP1S1
205195_at
AP1S1
205195_at
AP1S1
205574_x_at
BMP1
205574_x_at
BMP1
205574_x_at
205574_x_at
BMP1
205574_x_at
BMP1
205753_at
CRP
205753_at
CRP
205753_at
CRP
205753_at
CRP
205753_at
CRP
205900_at
KRT1
205900_at
205900_at
KRT1
205900_at
KRT1
205900_at
KRT1
205958_x_at
CSH2
205958_x_at
205958_x_at
CSH2
205958_x_at
CSHL1
205958_x_at
CSHL1
206087_x_at
HFE
206087_x_at
CSHL1
206087_x_at
206168_at
HFE
206168_at
ZC3H7B
206168_at
206087_x_at
HFE
206087_x_at
HFE
206168_at
ZC3H7B
206168_at
206261_at
ZNF239
206261_at
ZNF239
206261_at
ZC3H7B
ZNF239
206261_at
ZNF239
206261_at
206329_at
EXTL1
206329_at
EXTL1
ZNF239
206329_at
EXTL1
206329_at
EXTL1
206329_at
EXTL1
206442_at
SEMG1
206442_at
206628_at
SLC5A1
206628_at
SEMG1
206442_at
SEMG1
206442_at
SEMG1
206442_at
SEMG1
SLC5A1
206628_at
SLC5A1
206628_at
SLC5A1
206628_at
206639_x_at
HTN1
SLC5A1
206639_x_at
HTN1
206639_x_at
206639_x_at
HTN1
206639_x_at
HTN1
206742_at 206775_at
FIGF
206742_at
FIGF
206742_at
FIGF
206742_at
FIGF
206742_at
FIGF
CUBN
206775_at
CUBN
206775_at
CUBN
206775_at
CUBN
206775_at
CUBN
206831_s_at
ARSD
206831_s_at
ARSD
206831_s_at
ARSD
ARSD
206858_s_at
HOXC6
206858_s_at
206859_s_at
PAEP
206859_s_at
PAEP
206859_s_at
206997_s_at
HS6ST1
206997_s_at
HS6ST1
207020_at
HSF2BP
207020_at
HSF2BP
207028_at
MYCNOS
207028_at
207139_at
ATP4A
207139_at
207188_at
CDK3
207188_at
206831_s_at
ARSD
206831_s_at
206858_s_at
HOXC6
206858_s_at
HOXC4
PAEP
206859_s_at
PAEP
206859_s_at
PAEP
206997_s_at
HS6ST1
206997_s_at
HS6ST1
206997_s_at
HS6ST1
207020_at
HSF2BP
207020_at
HSF2BP
207020_at
HSF2BP
207028_at
MYCNOS
207028_at
MYCNOS
207139_at
ATP4A
207139_at
ATP4A
207188_at
CDK3
207188_at
CDK3
206858_s_at
207028_at ATP4A
207139_at
ATP4A
207188_at
207347_at
PGBD3
207347_at
ERCC6
207347_at
PGBD3
207347_at
PGBD3
207347_at
ERCC6
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207600_at
KCNC3
207665_at
ADAM21
207665_at
207665_at
ADAM21
207665_at
ADAM21
207665_at
ADAM21P
207824_s_at
MAZ
207824_s_at
MAZ
207824_s_at
MAZ
207824_s_at
MAZ
207967_at
VPS45
207967_at
VPS45 IL1RL2
207967_at
207824_s_at 207967_at
VPS45
207967_at
IL1RL2
208038_at
IL1RL2
208038_at
IL1RL2
208038_at
208226_x_at
ADAM22
208226_x_at
ADAM22
208226_x_at
ADAM22
208243_s_at
CNR1
208243_s_at
CNR1 RRH
208038_at
IL1RL2
208038_at
208226_x_at
ADAM22
208226_x_at
208243_s_at
CNR1
208243_s_at
CNR1
208243_s_at
208314_at
RRH
208314_at
RRH
208314_at
RRH
208314_at
RRH
208314_at
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208359_s_at
KCNJ4
208379_x_at
NPY2R
208379_x_at
NPY2R
208379_x_at
208379_x_at
208379_x_at
208391_s_at
GLP1R
208408_at
208391_s_at
GLP1R
208408_at
209742_s_at
MYL2
209742_s_at
209789_at
CORO2B
209789_at
209904_at
TNNC1
208391_s_at
GLP1R
208391_s_at
GLP1R
208408_at
208391_s_at
GLP1R
208408_at
PTN
208408_at
PTN
209742_s_at
209742_s_at
MYL2
209742_s_at
MYL2
CORO2B
209789_at
209789_at
CORO2B
209789_at
CORO2B
209904_at
TNNC1
209904_at
TNNC1
209951_s_at
MAP2K7
209951_s_at
MAP2K7
209951_s_at
MAP2K7
209951_s_at
MAP2K7
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210333_at
NR5A1
210393_at
LGR5
210393_at
210393_at
LGR5
210393_at
LGR5
210581_x_at
PATZ1
210581_x_at
PATZ1
210581_x_at
210581_x_at
PATZ1
210581_x_at
PATZ1
210701_at
CFDP1
210701_at
210701_at
CFDP1
210701_at
CFDP1
209951_s_at 210333_at
210701_at
209904_at
209904_at
210393_at PATZ1
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211473_s_at
COL4A6
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211620_x_at
RUNX1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211687_x_at
KIR2DL1
211708_s_at
SCD
211708_s_at
SCD
211708_s_at
LOC645313
211708_s_at
SCD
211708_s_at
SCD
211739_x_at
CSH2
211739_x_at
CSH2
211739_x_at
211958_at
IGFBP5
211958_at
212992_at
C14orf78
212992_at
212992_at
213231_at
DMWD
213231_at
213231_at
213449_at
POP1
213449_at
213884_s_at
TRIM3
213884_s_at
TRIM3
214158_s_at
PRDM10
214158_s_at
FABP1
214158_s_at
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214421_x_at
CYP2C9
214421_x_at
CYP2C9
IGFBP5
211739_x_at
GH1
211739_x_at
GH2
211958_at
IGFBP5
211958_at
IGFBP5
AHNAK2
212992_at
AHNAK2
212992_at
AHNAK2
DMWD
213231_at
DMWD
213231_at
DMWD
213449_at
213449_at
POP1
213449_at
POP1
213884_s_at
213884_s_at
TRIM3
213884_s_at
TRIM3
PRDM10
214158_s_at
PRDM10
214158_s_at
PRDM10
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214406_s_at
SLC7A4
214421_x_at
CYP2C19
214421_x_at
CYP2C9
214421_x_at
CYP2C9
211958_at
215012_at
215012_at
215012_at
215012_at
ZNF451
215012_at
KIAA1586
215403_at
215403_at
215403_at
215403_at
TRIO
215403_at
TRIO
215651_at
215651_at
215651_at
215651_at
SNF1LK2
215651_at
215692_s_at
215692_s_at
215692_s_at
215692_s_at
MPPED2
215692_s_at
MPPED2
215828_at
215828_at
215828_at
215828_at
ZFHX3
215828_at
ATBF1
216284_at
216284_at
216284_at
216284_at
CDC14B
216284_at
216721_at
216721_at
216721_at
216721_at
SLC25A30
216721_at
SLC25A30
216934_at
216934_at
216934_at
CLTB
217082_at
217082_at
217082_at
216934_at
MPPED2
CLTB
217082_at
217293_at ZHX3
217367_s_at
217447_at
217447_at
217567_at
217567_at
218685_s_at
CLTB
217082_at
217293_at 217367_s_at
216934_at
SMUG1
219153_s_at
217293_at ZHX3 TGM4
218685_s_at 219153_s_at
219249_s_at
FKBP10
219249_s_at
219531_at
CEP72
219531_at
219685_at
TMEM35
219685_at
219769_at
INCENP
219769_at
MPPED2
217367_s_at
TMEM35
217293_at
217367_s_at
ZHX3
217367_s_at
ZHX3
217447_at
217447_at
MAG
217447_at
MAG
217567_at
217567_at
TGM4
217567_at
TGM4
218685_s_at
218685_s_at
SMUG1
218685_s_at
SMUG1
219153_s_at FKBP10
217293_at ZHX3
THSD4
219249_s_at
219153_s_at
THSD4
219153_s_at
THSD4
219249_s_at
FKBP10
219249_s_at
FKBP10 CEP72
219531_at
CEP72
219531_at
CEP72
219531_at
219685_at
TMEM35
219685_at
TMEM35
219685_at
TMEM35
219769_at
INCENP
219769_at
INCENP
219769_at
INCENP
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
219926_at
POPDC3
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220125_at
DNAI1
220366_at
ELSPBP1
220366_at
220366_at
ELSPBP1
220505_at
C9orf53
220505_at
220505_at
220366_at
ELSPBP1
220505_at
CDKN2A FAM90A1
FAM90A1
220535_at
220535_at
FAM90A1
220535_at
220555_s_at
PDZD7
220555_s_at
220555_s_at
PDZD7
220555_s_at
PDZD7
220555_s_at
PDZD7
220645_at
FAM55D
220645_at
220645_at
FAM55D
220645_at
FAM55D
220645_at
FAM55D
220694_at
220694_at
220694_at
DDEF1IT1
220694_at
DDEF1IT1
221113_s_at
221113_s_at
221113_s_at
WNT16
221113_s_at
WNT16
221116_at
221116_at
221113_s_at
WNT16
221116_at 221917_s_at
221917_s_at
221948_s_at
221948_s_at
222025_s_at
OPLAH
220535_at
ELSPBP1 C9ORF53
220535_at
220694_at
FAM90A23
220366_at 220505_at
221917_s_at KLHL22
WNT16
221116_at GRSF1
221948_s_at
221917_s_at
GRSF1
221917_s_at
GRSF1
221948_s_at
KLHL22
221948_s_at
KLHL22 OPLAH
222025_s_at
222025_s_at
222025_s_at
OPLAH
222025_s_at
222167_at
222167_at
222167_at
222167_at
PVRL3
222167_at
PVRL3
222371_at
222371_at
222371_at
222371_at
PIAS1
222371_at
PIAS1
40273_at
40273_at
SPHK2
40273_at
DBP
91816_f_at
91816_f_at
MEX3D
91816_f_at
RKHD1
40273_at
SPHK2
40273_at
91816_f_at
RKHD1
91816_f_at
MEX3D
OPLAH
221116_at
A list of 100 Affymetrix IDs was extracted from a supplementary file of a published paper (PMID:16638148). These 100 Affymetrix IDs related to human genes were used as input and the lists of respective HGNC symbols were retrieved from each of the five in silico tools. Genes in green correspond to those retrieved by all five tools.
http://view.ncbi.nlm.nih.gov/pubmed/16638148 http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1553448&blobname=1471-2164-7-92-S4.xls
100
96
95
90
77
80 70
57
60
52
50 40
28
30 20 10 0 1
2
3
4
5
Conversion from Affymetrix IDs to HGNC symbols. Y axis: Number of retrieved HGNC symbols
1: DAVID Gene ID Conversion Tool 2: MatchMiner 3: Babelomics ID-Converter 4: Clone/Gene ID Converter 5: g:Profiler Gene ID Converter 6: Retrieved by all five tools Diego Forero, MD Editor, hum-molgen.org http://hum-molgen.org/
6
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