Reference

  • May 2020
  • PDF

This document was uploaded by user and they confirmed that they have the permission to share it. If you are author or own the copyright of this book, please report to us by using this DMCA report form. Report DMCA


Overview

Download & View Reference as PDF for free.

More details

  • Words: 6,706
  • Pages: 25
References ……………………………………..………...

References

REFERENCES

Abel PP, Nelson RS, Dc B. (1986) Delay of disease development in transgenic plants that express the tobacco mosaic virus coat protein gene. Science 1986;232:738.-43. Ames G. F-L., C.S. Mimura and Shyamala V. (1990) Bacterial periplasmic permeases belong to a family of transport proteins operating from Escherichia coli to human: traffic ATPases. FEMs Microbiological Review 75:429-446. Anderson, C (1993) Genome shortcut leads to problems. Science, 259, 1684-1687. Ankenbauer, R.G. and Nester E.W. (1990) Sugar-mediated induction of Agrobacterium tumefaciens virulence genes: structural specificity and activities of monosaccharides. Journal of Bacteriology 172:6442-6446. Bailey JA, Liu G, Eichler E.E(2003) An Alu transposition model for the origin and expansion of human segmental duplications. Am J Hum Genet.;73:823–834. doi: 10.1086/378594. Baron C., Llosa M., Zhou S. and Zambryski P.C. (1997) VirB1, a component of the T-complex transfer machinery of Agrobacterium tumefaciens is processed to a C-terminal secreted product VirB1*. Journal of Bacteriology 179:12031210. Batzer MA, Deininger P.L. (2002) Alu repeats and human genomic diversity. Nat Rev Genet.;3:370–379. doi: 10.1038/nrg798. Beaupre, CE, Bohne J., Dale E.M., and Binns A.N. (1997) Interactions between VirB9 and VirB10 proteins involved in the movement of DNA from Agrobacterium tumefaciens into plant cells. Journal of Bacteriology 179:7889. Beck, E., and B. Zink. (1981). Nucleotide sequence and genome organization of filamentous bacteriophage fl and fd. Gene 16:35-58. Beck, E., R. Sommer, E. A. Austrswald, C. Kunr, B. Zink, G. Osterberg, H. Schaller, K Sugimoto, H. Sugisakd, T. Okamoto, and M. Takanami. (1978) Nucleotide sequence of bacteriophage fd DNA. Nucleic Acids Res. 5:44954503. Beers F, Jongbloed A.W. ( l992) Effect of supplementary Aspergillus niger phytase in diets for piglets on their performance and apparent digestibility of phosphorus. Anim Prod;55:425-30.

165

References Bellet, A. J. D., H. G. Busse, and R. L. Baldwin. (1971) Tandem genetic duplication in a derivative of phage lambda, p. 501-513. In A. D. Hershey (ed.), Bacteriophage lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. Benhamou N, Broglie K, Broglie R, Chet I. (l993) Antifungal effect of bean endochitinase on Rhizoctonia solani: ultrastructural changes and cytochemical aspects of chitin breakdown. Can I Microbiol;39: 3 18-28. Benvenuto, E., Ordas, R. J., Tavazza, R., Ancora, G., Biocca, S., Cattaneo, A. and Galeffi, P. (1991) Plant Mol. Biol, 17, 865–874. Berger B.R. and Christie P.J. (1993) The Agrobacterium tumefaciens virB4 gene product is an essential virulence protein requiring an intact nucleoside triphosphate-binding domain. Journal of Bacteriology 175: 1723-1734. Berger, B.R. and Christie P.J. (1994) Genetic complementation analysis of the Agrobacterium tumefaciens virB operon: virB2 through virB11 are essential virulence genes. Journal of Bacteriology 176:3646-3660. Bevan M. (1984) Binary Agrobacterium vectors for plant transformation. Nucleic Acids Res 12: 8711–8721 Bingham, P. M., Kidwell, (1982) Cell 29:995-1004.

M.

G.

and

Rubin,

G.

M.

Binns A.N., Beaupre C.E.and Dale E.M. (1995) Inhibition of VirB-mediated transfer of diverse substrate from Agrobacterium tumefaciens by the IncQ plasmid RSF1010. Journal of Bacteriology 177:4890-4899. Blattner, F. R., B. G. Williams, A. E. Blechl, K. Denniston- Thompson, H. E. Faber, L. E. Furlong, D. J. Grunwald, D. 0. Keifer, D. D. Moore, J. W. Schumm, and D. Smithies. (1977) Charon phages: safer derivatives of bacteriophage lambda for DNA cloning. Science 196:161-169. Boysen, C., Simon, M.I. and Hood, L. (1997) Fluorescence-based sequencing directly from bacterial and P1-derived artificial chromosomes. BioTechniques, 23, 978-982. Bradley L.R., Kim J.S. and Matthysse A.G. (1997) Attachment of Agrobacterium tumefaciens to Carrot Cells and Arabidopsis wound sites is correlated with the

166

References presence of a cell-associated, acidic polysaccharide. Journal of Bacteriology 179:5372-5379. Bravo Angel A.M, Hohn B. and Tinland B. (1998) The omega sequence of VirD2 is important but not essential for efficient transfer of the T-DNA by Agrobacterium tumefaciens. Molecular Plant-Microbe Interactions 11:57-63. Briggs SP. (1992) Identification and isolation of agronomically important genes from plants. In: Stalker HT, Murphy JP, eds. Plant breeding in the 1990s. Wallingford, CT: CAB International,:373-87. Bundock P., den Dulk-Ras A., Beijerbergen A. and Hooykaas P.J.J. (1995). Transkingdon T-DNA transfer from Agrobacterium tumefaciens to Saccharomyces cerevisiae. EMBO Journal 14:3206-3214. Burke, D.T . (1990) YAC cloning: options and problems. GATA, 7, 94-99. Burke, D.T., Carle, G. and Olsen, M.V. (1987) Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science, 236, 806-812. Cai, L., Taylor, J.F., Wing, R.A., Gallagher, D.S., Woo, S.-S. and Davis, S.K. (1995) Construction and characterization of a bovine bacterial artificial chromosome library. Genomics, 29, 413-425. Cai, W.-W., Reneker, J., Chow, C.-W., Vaishnav, M. and Bradley, A. (1998) An anchored framework BAC map of mouse chromosome 11 assembled using multiplex oligonucleotide hybridization. Genomics, 54, 387-397. Cangelosi G.A., Ankenbauer R.G. and Nester E.W. (1990) Sugars induce the Agrobacterium virulence genes through a periplasmic binding protein and a transmembrane signal protein. Proceedings of the National Academy of Sciences USA 87:6708-6712. Cangelosi G.A., Hung L., Puvanesarajah V., Stacey G., Ozga D.A., Leigh J.A. and Nester E.W. (1987) Common loci for Agrobacterium tumefaciens and Rhizobium meliloti exopolysaccharide synthesis and their role in plant interaction. Journal of Bacteriology 169:2086-2091. Carson, R. (1962) Silent Spring. The Riverside Press, Cambridge.

167

References Chang C.H. and Winans S.C. (1992) Functional roles assigned to the periplasmic, linker and receiver domains of the Agrobacterium tumefaciens VirA protein. Journal of Bacteriology 174:7033-7039. Chawla.H.S. (2003)Introduction to plant biotechnology, Oxford and IBH Publishing Co.Pvt.Ltd.new Delhi,pp.211. Chen JM, Stenson PD, Cooper DN, Ferec C. (2005)A systematic analysis of LINE1 endonuclease-dependent retrotranspositional events causing human genetic disease. Hum Genet;117:411–427. doi: 10.1007/s00439-005-1321-0. Chen QJ, Zhou HM, Chen J, Wang XC. (2006) A Gateway-based platform for multigene plant transformation. Plant Mol Biol 62: 927–936 Cheng M, Lowe BA, Spencer TM, Ye X, Armstrong CL. (2004) Factors influencing Agrobacterium-mediated transformation of monocotyledonous species. In Vitro Cell Dev Biol Plant 40: 31–45 Choi, S., Creelman, R.A., Mullet, J.E. and Wing, R.A. (1995) Construction and characterization of bacterial artificial chromosome library of Arabidopsis thaliana. Plant Mol. Biol. Reptr. Christensen AH, Sharrock RA, Quail PH. (1992) Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation. Plant Mol Biol 18: 675–689. Christie P.J. (1997) Agrobacterium tumefaciens T-complex transport apparatus: a paradigm for a new family of multifunctional transporters in Eubacteria. Journal of Bacteriology 179:3085-3094. Cooper B, Lapidot M, Heick JA, Beachy RN, Dodds JA. (1994) Multi-virus resistance in transgenic tobacco plants expressing a tobacco mosaic virus dysfunctional movement protein. In: Scientific program and abstracts of the 13th annual meeting of the American Society for Virology. Madison, WI: American Society for Virology; p:250. Cordaux R, Udit S, Batzer MA, Feschotte C. ( 2006) Birth of a chimeric primate gene by capture of the transposase gene from a mobile element. Proc Natl Acad Sci USA;103:8101–8106. doi: 10.1073/pnas.0601161103.

168

References Cramer, C. L., Weissenborn, D. L., Oishi, K. K., Grabau, E. A., Bennett, S., Ponce, E., Grabowski, G. A. and Radin, D. N.( 1996) Ann. NY Acad. Sci., 792; 62–71. Danesh, D., Peñula, S., Mudge, J., Denny, R.L., Nordstrom, H., Martinez, J.P. and Young, N.D. (1998) A bacterial artificial chromosome library for soybean and identification of clones near a major cyst nematode resistance gene. Theor. Appl. Genet., 96;p:196-202. Dang T.A.T. and Christie P.J. (1997) The VirB4 ATPase of Agrobacterium tumefaciens is a cytoplasmic membrane protein exposed at the periplasmic surface. Journal of Bacteriology 179:453-462. Das A. and Xie Y.H. (1998) Construction of transposon Tn3phoA: its application in defining the membrane topology of the Agrobacterium tumefaciens DNA transfer proteins. Molecular Microbiology 27:405-414. Davidson, N., and W. Szybalski. (1971) Physical and chemical characteristics of lambda DNA. In A. D. Hershey (ed.), Bacteriophage lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor N.Y p 45-82. Davis, R. W., and J. S. Parldnson. (1971) Deletion mutants of lambda. III. Physical structure of attO. J. Mol. Biol. 56:403- 423. De Block, M., Herrera-Estrella, L., van Montagu, M., Schell, J. and Zambryski, P. (1984) EMBOJ, 3; 1681–1689. Deblaere R, Reynaerts A, Höfte H, Hernalsteens JP, Leemans J, Van Montagu M. (1987) Vectors for cloning in plant cells. Methods Enzymol 153: 277–292. Depicker A, Stachel S, Dhaese P, Zambryski P, Goodman HM. (1982) Nopaline synthase: transcript mapping and DNA sequence. J Mol Appl Genet 1: 561– 573. Dotto, G. P., and N. D. Zinder. (1983) The morphogenetic signalof bacteriophage fl. Virology 130:252-256. Dotto, G. P., K. Horinuchi, and N. D. Zinder. (1984) The functional origin of bacteriophage fl DNA replication: its signal and domains. J. Mol. Biol. 172:507-521.

169

References Doty S.L., Yu N.C., Lundin J.I., Heath J.D. and Nester E.W. (1996) Mutational analysis of the input domain of the VirA protein of Agrobacterium tumefaciens. Journal of Bacteriology 178:961-970. Douglas C.J., Halperin W. and Nester E.W. (1982) Agrobacterium tumefaciens mutants affected in attachment to plant cell. Journal of Bacteriology 152:1265-1275. During, K., Hippe, S., Kreuzaler, F. and Schell, J. (1990)

Plant Mol. Biol. 15,

281–293. Dürrenberger F., Crameri A., Hohn B. and Koukolikova-Nicola Z. (1989) Covalently bound VirD2 protein of Agrobacterium tumefaciens protects the TDNA from exonucleolytic degradation. Proceedings of the National Academy of Sciences of USA 86:9154-9158. Elledge, S. J., and G. C. Walker. (1985) Phasmid vectors for identification of genes by complementation of Eschenchia coli mutants. J. Bacteriol. 162:777-783. Fedoroff, N. (1983) Mobile Genetic Elements, J. Shapiro, Ed., (Academic Press) New York, pp. 1-63. Fernández D., Spudich G.M., Zhou X.R., Berger B.R. and Christie P.J. (1996) Agrobacterium tumefaciens VirB7 lipoprotein is required for stabilisation of VirB proteins during assembly of the T-complex transport apparatus. Journal of Bacteriology 178:3168-3176. Filichkin S.A. and Gelvin S.B. (1993) Formation of a putative relaxation intermediate during T-DNA processing directed by Agrobacterium tumefaciens VirD1/D2 endonuclease. Molecular Microbiology 8:915-926. Finberg K.E., Muth T.R., Young S.P., Maken J.B., Heitritter S.M., Binns A.N. and Banta L.M. (1995) Interactions of VirB9, -10 and -11 with the membrane fraction of Agrobacterium tumefaciens: solubility studies provide evidence of tight associations. Journal of Bacteriology 177:4881-4889. Findenegg GR, Nelernans JA. (l993) The effect of phytase on the availability of P from myo-inositol hexaphosphate (phytate) for maize roots. Plant Soil;l54: 189-96.

170

References Firth N., Ippen-Ihler K. and Skurray R.A. (1996) Structure and function of the F factor and mechanism of conjugation, p. 2377-2401. Food Standards Agency. (2002). GO10008 Evaluating the risks associated with using GMOs in human foods. www.foodstandards.gov.uk/science/sciencetopics/gmfoods/gm_reports Fox, M.W. (1992) Superpigs and Wondercorn. Lyons and Burford Publ., New York. Fraley RT, Rogers SG, Horsch RB (1986) Genetic transformation in higher plants. CRC Crit Rev Plant Sci 4: 1–46. Fullner K.J., Lara J.C. and Nester E.W. (1996) Pilus assembly by Agrobacterium T-DNA transfer genes. Science 273:1107-1109. Gerdes K, Rasmussen PB, Molin S. (1986) "Unique type of plasmid maintenance function: postsegregational killing of plasmid-free cells". Proc. Natl. Acad. Sci. U.S.A. 83 (10): 3116. doi:10.1073/pnas.83.10.3116. Gheysen G., Villarroel R. and Van Montagu M. (1989) Illegitimate recombination in plants: a model for T-DNA integration. Genes Development 5:287-297. Golemboski BB, Lomonossoff GP, Zaitlin M. (1990) Plants transformed with a tobacco mosaic nonstructural gene sequence are resistant to the virus. Proc Nail Acad Sci U S A;87:63ll-5. Green, E.D., Riethman, H.C., Dutchik, J.E. and Olson, M.V. (1991) Detection and characterization of chimeric yeast artificial-chromosome clones. Genomics, 11, 658 - 669. Hajdukiewicz P, Svab Z, Maliga P. (1994) The small, versatile pPZP family of Agrobacterium binary vectors for plant transformation. Plant Mol Biol 25: 989–994. Hamilton, C.M. (1997) A binary-BAC system for plant transformation with high molecular weight DNA. Gene 200:107-116. Han JS, Boeke JD. (2004)LINE-1 retrotransposons: modulators of quantity and quality of mammalian gene expression? Bioessays.;27:775–784. doi: 10.1002/bies.20257.

171

References Hanson B, Engler D, Moy Y, Newman B, Ralston E, Gutterson N. (1999) A simple method to enrich an Agrobacterium-transformed population for plants containing only T-DNA sequences. Plant J 19: 727–734. Hanson, R.E., Zwick, M.S., Choi, S., Islam-Faridi, M.N., McKnight, T.D., Wing, R.A., Price, H.J. and Stelly, D.M. (1995) Fluorescent in situ hybridization of a bacterial chromosome. Genome, 38, 646-651. Haq, T. A., Mason, H. S., Clements, J. D. and Artnzen, C. J.(1995) Science, 268, 714–715. Heath J.D., Charles T.C. and Nester E.W. (1995) Ti plasmid and chromosonally encoded two-component systems important in plant cell transformation by Agrobacterium tumefaciens, p. 367-385. In: Hoch J.A. and Silhavy T.J. (ed.), Two-component signal transduction. ASM Press, Washington DC. Hedges DJ, Batzer MA. (2005) From the margins of the genome: mobile elements shape primate evolution. Bioessays.;27:785–794. doi: 10.1002/bies.20268. Heinemann J.A. and Sprague G.F. (1989) Bacterial conjugative plasmids mobilise DNA transfer between bacteria and yeast. Nature 340:205-209. Hellens R, Mullineaux P, Klee H. (2000) Technical focus: a guide to Agrobacterium binary Ti vectors. Trends Plant Sci 5: 446–451. Herrera-Estrella, A, M Van Montagu and K Wang. (1990) A bacterial peptide acting as a plant nuclear targeting signal: the amino-terminal portion of Agrobacterium VirD2 protein directs the b -galactosidase fusion protein into tobacco nuclei. Proceedings of the National Academy of Sciences of the USA 87:9534-9537. Hiatt, A. and Mostov, K. (1993) in Transgenic Plants: Fundamentals and Applications (ed. Hiatt, A.), Marcel Dekker, Inc, New York, pp. 221–237. Hiei Y, Ohta S, Komari T, Kumashiro T. (1994) Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA. Plant J 6: 271–282. Higgings C.F., Hyde S.C., Mimmack M.M., Gileadi U., Gill D.R. and Gallagher M.P. (1990) Binding protein-dependent transport systems. Journal of Bioenergy and Biomembranes 22:571-592.

172

References Hille J., Wullems G., Schilperoort R.A. (1983) Non-oncogenic T-region mutants of Agrobacterium tumefaciens do transfer T-DNA into plant cells. Plant Molecular Biology 2:155-163. Hirschberg, J. (2001) Carotenoid biosynthesis in flowering plants. Current Opinion in Plant Biology 4:210-218 . Hoekema A, Hirsch PR, Hooykaas PJJ, Schilperoort RA (1983) A binary plant vector strategy based on separation of vir- and T-region of the Agrobacterium tumefaciens Ti-plasmid. Nature 303: 179–180. Hohn, B. (1979) In vitro packaging of lambda and cosmid DNA. Methods Enzymol. 68:299-309. Hood EE, Helmer GL, Fraley RT, Chilton MD. (1986) The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA. J Bacteriol 168: 1291–1301. Hooykaas P.J.J. and Shilperoort R.A. (1992) Agrobacterium and plant genetic engineering. Plant Molecular Biology 19:15-38. Hoyt, M. A., D. M. Knight, A. Das, H. Miller, and H. Echols (1982) Control of phage lambda development by stability and synthesis of cII protein: role of the viral cIII and host hflA, himA and himD genes. Cell 31:565-573. Huang S, Gilbertson LA, Adams TH, Malloy KP, Reisenbigler EK, Birr DH, Snyder MW, Zhang Q, Luethy MH. (2004) Generation of marker-free transgenic maize by regular two-border Agrobacterium transformation vectors. Transgenic Res 13: 451–461. Huang Y., Morel P., Powell B. and Kado C.I. (1990) VirA, a coregulator of Tispecified virulence genes, is phosphorylated in vitro. Journal of Bacteriology 172:1142-1144. Ishida Y, Murai N, Kuraya Y, Ohta S, Saito H, Hiei Y, Komari T. (2004) Improved co-transformation of maize with vectors carrying two separate TDNAs mediated by Agrobacterium tumefaciens. Plant Biotechnol 21: 57–63. Ishida Y, Saito H, Ohta S, Hiei Y, Komari T, Kumashiro T. (1996) High efficiency transformation of maize (Zea mays L.) mediated by Agrobacterium tumefaciens. Nat Biotechnol 14: 745–750. Iuchi S. (1993) Phosphorylation/dephosphorylation of the receiver module at the conserved aspartate residue controls transphosphorylation activity of histidine

173

References kinase in sensor protein ArcB of Escherichia coli. Journal of Biological Chemistry 268:23972-23980. Jayaram, M. (1994). Phosphoryl transfer if FLP recombination: a template for strand transfer mechanisms. Trends Biotechnology. 19:78-82. Jefferson RA. (1987) Assaying chimeric genes in plants: the GUS gene fusion system. Plant Mol Biol Rep 5: 387–405. Jia H, Pang Y, Chen X, Fang R (2006) Removal of the selectable marker gene from transgenic tobacco plants by expression of Cre recombinase from a tobacco mosaic virus vector through agroinfection. Transgenic Res 15: 375–384. Jin S, Komari T, Gordon MP, Nester EW. (1987) Genes responsible for the supervirulence phenotype of Agrobacterium tumefaciens A281. J Bacteriol 169: 4417–4425. Jin S., Prusti R.K., Roitsch T., Ankenbauer R.G. and Nester E.W. (1990a) The VirG protein of Agrobacterium tumefaciens is phosphorylated by the autophosphorylated VirA protein and this is essential for its biological activity. Journal of Bacteriology 172: 4945-4950. Jin S., Song Y., Pan S. and Nester E.W. (1993) Characterisation of a virG mutation that confers constitutive virulence gene expression in Agrobacterium tumefaciens. Molecular Microbiology 7:555-562. Jin, S, T Roitisch, Christie P.J. and Nester E.W. (1990b) The regulatory VirG protein specifically binds to a cis acting regulatory sequence involved in transcriptional activation of Agrobacterium tumefaciens virulence genes. Journal of Bacteriology 172:531-562. JMBM van der Vossen et al. “Development and application of an in vitro intestinal tract model for safety evaluation of genetically modified foods” in Food Safety Evaluation of Genetically Modified Foods as a Basis for Market Introduction. pp 81-99. Ministry of Economic Affairs, PO Box 20101, 2500 EC, The Hague, The Netherlands. Jones A.L., Lai E.M., Shirasu K. and Kado C.I. (1996) Vir B2 is a processed pilinlike protein encoded by the Agobacterium tumefaciens Ti plasmid. Journal of Bacteriology 178:5706-57112.

174

References Jouanin L, Vilaine F, d'Enfert C, Casse-Delbart F. (1985) Localization and restriction maps of the replication origin regions of the plasmids of Agrobacterium rhizogenes strain A4. Mol Gen Genet 201: 370–374. Judgement of Justice Andrew Mackay, Federal Court of Canada 29/03/2001 on the case between Monsanto Canada Inc and Monsanto Company (Plaintiffs) and Percy Schmeiser and Schmeiser Enterprises Ltd (Defendants) Docket No T1593-98. Neutral Citation: 2001 FCT 256. Kanemoto R.H., Powell A.T., Akiyoshi D.E., Regier D.A., Kerstetter R.A., Nester E.W., Hawes M.C. and Gordon M.P. (1989) Nucleotide sequence and analysis of the plant-inducible locus pinF from Agrobacterium tumefaciens. Journal of Bacteriology 171:2506-2512. Karn, J., S. Brammer, L. Barnett, and G. Cesareni (1980) Novel bacteriophage lambda cloning vector. Proc. Natl. Acad. Sci. USA 77:5172-5176. Kazazian HH Jr. (2004) Mobile elements: drivers of genome evolution. Science.;303:1626–1632. doi: 10.1126/science.1089670. Kim, U.-J., Birren, B.W., Slepak, T., Mancino, V., Boysen, C., Kang, H.-L., Simon, M.I. and Shizuya, H. (1996) Construction and characterization of a human bacterial artificial chromosome library. Genomics, 34, 213-218. Kolomietz E, Meyn MS, Pandita A, Squire JA. (2002) The role of Alu repeat clusters as mediators of recurrent chromosomal aberrations in tumors. Genes Chromosomes Cancer;35:97–112. doi: 10.1002/gcc.10111. Komari T. (1990) Transformation of cultured cells of Chenopodium quinoa by binary vectors that carry a fragment of DNA from the virulence region of pTiBo542. Plant Cell Rep 9: 303–306. Komari T, Hiei Y, Saito Y, Murai N, Kumashiro T. (1996) Vectors carrying two separate T-DNAs for co-transformation of higher plants mediated by Agrobacterium tumefaciens and segregation of transformants free from selection markers. Plant J 10: 165–174. Komari T, Takakura Y, Ueki J, Kato N, Ishida Y, Hiei Y. (2006) Binary vectors and super-binary vectors. In K Wang, ed, Methods in Molecular Biology, Vol 343: Agrobacterium Protocols, Ed 2, Vol 1. Humana Press, Totowa, NJ, pp 15–41.

175

References Krizkova L, Hrouda M. (1998) Direct repeats of T-DNA integrated in tobacco chromosome: characterization of junction regions. Plant J 16: 673–680. Kuldau G.A., DeVos G., Owen J., McGaffrey G. and Zambryski P. (1990) The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open reading frames. Molecular General Genetics 221:256-266. Kuraya Y, Ohta S, Fukuda M, Hiei Y, Murai N, Hamada K, Ueki J, Imaseki H, Komari T. (2004) Suppression of transfer of non-T-DNA "vector backbone" sequences by multiple left border repeats in vectors for transformation of higher plants mediated by Agrobacterium tumefaciens. Mol Breed 14: 309– 320. Lederberg. J (1952) Cell genetics and hereditary symbiosis. Physiol. Rev. 32 (4): 403–30. Lee SH, Oshige M, Durant ST, Rasila KK, Williamson EA, Ramsey H, Kwan L, Nickoloff JA, Hromas R. (2005)The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair. Proc Natl Acad Sci USA.;102:18075–18080. doi: 10.1073/pnas.0503676102. Lehman C.W., Trautman J.K. and Carroll D. (1994) Illegitimate recombination in Xenopus: characterisation of end-joined junctions. Nucleic Acid Research 22:434-442. Lessl M. and Lanka E. (1994). Common mechanisms in bacterial conjugation and Ti-mediated T-DNA transfer to plant cells. Cell 77:321-324.

Lipps G. (editor). (2008) Plasmids: Current Research and Future Trends. Caister Academic Press. ISBN 978-1-904455-35-6. Liu D, Bischerour J, Siddique A, Buisine N, Bigot Y, Chalmers R. ( 2006) The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase. Mol Cell Biol.;27:1125–1132. doi: 10.1128/MCB.0189906. Liu Y-G, Shirano Y, Fukaki H, Yanai Y, Tasaka M, Tabata S, Shibata D. (1999) Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning. Proc Natl Acad Sci USA 96: 6535–6540.

176

References Lodge JK, Kaniewski WK, Turner NE. (l993) Broad-spectrum virus resistance in transgenic plants expressing pokeweed antiviral protein. Proc Natl Acad Sci U S A;90:7089-93. Loomis, W.D. (1974)Overcoming problems of phenolics and quinones in the isolation of plant enzymes and organelles. Methods Enzymol., 31, 528-544. Ma, J. K.-C., Hiatt, A., Hein, M. B., Vine, N., Wang, F., Stabila, P., Van Dolleweerd, C., Mostov, K. and Lehner, T. ( 1995) Science, 268, 716–719. Marra, M.A., Kucaba, T.A., Dietrich, N.J., Green, E.D., Brownstein, B., Wilson, R.K., McDonald, K.M., Hillier, L.W., McPherson, J.D. and Waterson, R.H. (1997) High throughput fingerprint analysis of large-insert clones. Genome Res., 7, 1072-1084. Mason, H. S. and Arntzen, C. J. (1995 ) Trends Biotechnol., 13, 388–392. Matthysse A.G., Yarnall H.A. and Young N. (1996) Requirement for genes with homology to ABC transport system for attachment and virulence of Agrobacterium tumefaciens. Journal of Bacteriology 178:5302-5308. McClintock, B. (1950) "The origin and behavior of mutable loci in maize. Proc Natl Acad Sci U S A. 36 (6): 344–55. McClintock, B. (1945) Carnegie Inst. of Wash. Year Book 44:108-112. McClintock, B. (1946) Carnegie Inst. of Wash. Year Book 45:176-186. McClintock, B. (1947) Carnegie Inst. Of Wash. Year Book 46:146-152. McClintock, B. (1948) Carnegis Inst. of Wash. Year Book 47:155-169. McClintock, B. (1951) Cold Spring Harbor Symp. Quant. Biol. 16:13-47. Mead, D. A., E. Szczesna-Skorupa, and B. Kemper. (1985) Single stranded DNASP6 promoter plasmids for engineering mutant RNAs and proteins: synthesis of a "stretched" preproparathyroid hormone. Nucleic Acids Res. 13:1103-1118. Meissner, P. S., W. P. Sisk, and M. L. Berman. (1987) Bacteriophage lambda cloning system for the construction of directional cDNA libraries. Proc. Natl. Acad. Sci. USA 84:4171-4175. 177

References Miki D, Shimamoto K (2004) Simple RNAi vectors for stable and transient suppression of gene function in rice. Plant Cell Physiol 45: 490–495. Miller WJ, Hagemann S, Reiter E, Pinsker W. (1992) P-element homologous sequences are tandemly repeated in the genome of Drosophila guanche. Proc Natl Acad Sci USA.;89:4018–4022. doi: 10.1073/pnas.89.9.4018. [PubMed] Modelska, A., Dietzschold, B., Sleysh, N., Fu, Z. F., Steplewski, K., Hooper, D. C., Koprowski, H. and Yusibov, V.(1997) Proc. Natl. Acad. Sci. USA, 95, 2481– 2485. Moffat AS. (1994) Mapping the sequence of disease resistance. Science:265:1804-5. Moore SK, Srivastava V (2006) Efficient deletion of transgenic DNA from complex integration locus of rice mediated by Cre/lox recombination system. Crop Sci 46: 700–705. Moullet, O., Zhang, H.-B. and Lagudah, E.S. (1999) Construction and characterisation of a large DNA insert library from the D genome of wheat. Theor. Appl. Genet., 99, 305-313. Mozo, T., Dewar, K., Dunn, P., Ecker, J.R., Fischer, S., Kloska, S., Lehrach, H., Marra, M., Martienssen, R., Meier-Ewert, S. and Altmann, T. (1999) A complete BAC-based physical map of the Arabidopsis thaliana genome. Nat. Genet., 22, 271-275. Murray, N. E. (1983) Phage lambda and molecular cloning, p. 395-432. In R. W. Hendrix, J. W. Roberts, F. W. Stahl, and R. A. Weisberg (ed.), Lambda II. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. Murray, N. E., and K. Murray. (1974) Manipulations of restriction targets in phage lambda to form receptor chromosomes for DNA fragments. Nature (London) 251:476-481. Nakamura, S., Asakawa, S., Ohmido, N., Fukui, K., Shimizu, N. and Kawasaki, S. (1997) Construction of an 800-kb contig in the near-centromeric region of the rice blast resistance gene Pita2 using a highly representative rice BAC library. Mol. Gen. Genet., 254, 611-620. Nam, Y.-W., Penmesta, R.V., Endre, G., Uribe, P., Kim, D., and Cook, D.R. (1999) Construction of a bacterial artificial chromosome library of Medicago truncatula and identification of clones containing ethylene-response genes. Theor. Appl. Genet., 98, 638-646.

178

References Neil, D.L., Villasante, A., Fisher, R.B., Vetrie, D., Cox, B. and Tyler-Smith, C. (1990) Structural instability of human tandemly repeated DNA sequences cloned in yeast artificial chromosome vectors. Nucleic Acids Res., 18, 14211428. Nicholas, R.B. (1991) In Agricultural Biotechnology at the Crossroads. Biological, Social and Institutional Concerns. J.F. Macdonald (ed.), Report 3 of the National Agricultural Biotechnology Council, Ithaca. Nixon B.T., Ronson C.W. and Ausubel F.M. (1986) Two-component regulatory systems responsive to environmental stimuli share strongly conserved domains with the nitrogen assimilation regulatory genes ntrB and ntrC. Proceedings of National Academy of Sciences of the USA 83:7850-7854. O’Connor, M., Peifer, M. and Bender, W. (1989) Construction of large DNA segments in Escherichia coli. Science, 244, 1307-1312. Odell JT, Nagy F, Chua NH. (1985) Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter. Nature 313: 810–812 Odell JT, Russell RH. (1994) In: Paszkowski J, editor. Homologous recombination in plant. Dordrecth: Kluwer Academic Publishers. p 219-270. Oger P., Kim K.S., Sackett S.L., Piper K.R. and Farrand S.K. (1998). Octopinetype Ti plasmids code for mannopine-inducible dominant-negative allele of TraR, the quorum-sensing activator that regulates Ti plasmid conjugal transfer. Molecular Microbiology 27:277-288. Okamoto S., Toyoda-Yamamoto A., Ito K., Takebe I. and Machida Y. (1991). Localisation and orientation of the VirD4 protein of Agrobacterium tumefaciens in cell membrane. Molecular General Genetics 228:24-32. Okayama, H., and P. Berg (1985) Bacteriophage lambda vector for transducing a cDNA clone library into mammalian cells. Mol. Biol. 5:1136-1142. Okumura MS, Kado CI (1992) The region essential for efficient autonomous replication of pSa in Escherichia coli. Mol Gen Genet 235: 55–63. Ostertag EM, Goodier JL, Zhang Y, Kazazian HH Jr. (2003) SVA elements are nonautonomous retrotransposons that cause disease in humans. Am J Hum Genet;73 :1444–1451. 10.1086/380207.

179

References Ow DW (2001) The right chemistry for marker gene removal? Nat Biotechnol 19: 115–116. Ow DW, Wood KV, DeLuca M, de Wet JR, Helinski DR, Howell SH (1986) Transient and stable expression of the firefly luciferase gene in plant cells and transgenic plants. Science 234: 856–859. Owen, M., Gandecha, A., Cockburn, B. and Whitelam, G. (1992) Biotechnology, 10, 790–794. Palazzolo, M. J., and E. M. Meyerowitz. (1987) A family of lambda phage cDNA cloning vectors, lambda SWAJ, allowing the amplification of RNA sequences. Gene 52:197-206. Pan S.Q., Charles T., Jin S., Wu Z.L. and Nester E.W. (1993) Pre-formed dimeric state of the sensor protein VirA is involved in plant-Agrobacterium signal transduction. Proceedings of the National Academy of Sciences of the USA 90:9939-9943. Pang S-Z, DeBoer DL, Wan Y, Ye G, Layton JG, Neher MK, Armstrong CL, Fry JE, Hinchee MAW, Fromm ME. (1996) An improved green fluorescent protein gene as a vital marker in plants. Plant Physiol 112: 893–900. Pansegrau W, Lanka E, Barth PT, Figurski DH, Guiney DG, Haas D, Helinski DR, Schwab H, Stanisich VA, Thomas CM. (1994) Complete nucleotide sequence of Birmingham IncP plasmids. Compilation and comparative analysis. J Mol Biol 239: 623–663. Parkinson J.S. (1993). Signal transduction schemes of bacteria. Cell 73:857-871. Pen J, Verwoerd IC, van Paridon PA, et al. (1993) Phytase-containing transgenic seeds as a novel feed additive for improved phosphorus utilization. Biotechnology (N Y);l 1:811-4. Peralta E.G., Ream L.W. (1985) T-DNA border sequence required for crown gall tumorigenesis. Proceedings of the National Academy of Sciences of the USA 82:5112-5116. Peterson, D.G., Boehm, K.S. and Stack, S.M. (1997) Isolation of milligram quantities of DNA from tomato (Lycopersicon esculentum), a plant containing high levels of polyphenolic compounds. Plant Mol. Biol. Reptr., 15, 148-153.

180

References Peterson, D.G., Lapitan, N.L.V. and Stack, S.M. (1999) Localization of single- and low-copy sequences on tomato synaptonemal complex spreads using fluorescence in situ hybridization (FISH). Genetics, 152, 427-439. Petterson O. (1993) In The Pesticide Question: Environment, Economics and Ethics; D. Pimentel and H. Lehman (eds.), Chapman and Hall, New York. Piers K.L., Heath J.D., Liang X., Stephens K.M. and Nester E.W. (1996) Agrobacterium tumefaciens-mediated transformation of yeast. Proceedings of the National Academy of Sciences of the USA 93:1613-1618. Podevin N, Buck SD, Wilde CD, Depicker A. (2006) Insights into recognition of the T-DNA border repeats as termination sites for T-strand synthesis by Agrobacterium tumefaciens. Transgenic Res 15: 557–571. Pohlman R.F., Genetti H.D. and Winans S.C. (1994) Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens. Molecular Microbiology 14:655-668. Ptashne, M. (1971) Repressor and its action, In A. D. Hershey (ed.), Bacteriophage lambda. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. p. 221237. Puchta H. (1998) Repair of genomic double-strand breaks in somatic cells by oneside invasion of homologous sequences. Plant Journal 13:331-339. Raleigh, E. A., N. E. Murray, H. Revel, R. M. Blumenthal, D. Westaway, A. D. Reith, P. W. J. Rigby, J. Elhai, and D. Hanahan. (1988) McrA and McrB restriction phenotypes of some of E. coli strains and implications for gene cloning. Nucleic Acids Res. 16:1563-1575. Rambach, A., and P. Toillais. (1974) Bacteriophage lambda having EcoRI endonuclease site only in the non-essential region of the genome. Proc. Natl. Acad. Sci. USA 71:3927 3930. Rashkova S., Spudlich G.M. and Christie P.J. (1997) Characterisation of membrane and protein interaction determinants of the Agrobacterium tumefaciens VirB11 ATPase. Journal of Bacteriology 179:583-591. Robertson HM, Zumpano KL. (1997) Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome. Gene. 205:203–217. doi: 10.1016/S0378-1119(97)00472-1.

181

References Rogowsky P.M., Powell B.S., Shirasu K., Lim T.S., Morel P., Zyprian E.M., Steck T.R. and Kado C.I. (1990) Molecular characterisation of the vir regulon of Agrobacterium tumefaciens: complete nucleotide sequence and gene organisation of the 28.63 kbp regulon cloned as single unit. Plasmid 23:85106. Rosenberg, S. M. (1987) Improved in vitro packaging of lambda DNA. Methods Enzymol. 153:95-103. Rosenberg, S. M., M. M. Stahl, J. Kobayashi, and F. W. Stahl. (1985) Improved in vitro packaging of coliphage lambda DNA: a one-strain system free from endogenous phage. Gene 38:165-175. Rossi L., Hohn B. and Tinland B. (1993) Vir D2 protein carries nuclear localisation signals important to transfer of T-DNA to plants. Molecular General Genetics 239:345-353. Sambrook, J., E. F. Fritsch, and T. Maniatis (1989) Molecular cloning: a laboratory manual. vol. I. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. Sambrook J, Russell DW. (2001) Molecular Cloning: A Laboratory Manual, Ed 3. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY . Schaub, P. (2005) Why Is Golden Rice Golden (Yellow) Instead of Red? Plant Physiology 138:441–450. Seed, B. (1983) Purification of genomic sequences from bacteriophage libraries by recombination and selection in vivo. Nucleic Acids Res. 11:2427-2445. Seligman L. and Manoil C. (1994) An amphipathic sequence determinant of membrane protein topology. Journal of Biological Chemistry 269:1988819896. Sen SK, Han K, Wang J, Lee J, Wang H, Callinan PA, Dyer M, Cordaux R, Liang P, Batzer MA. (2006) Human genomic deletions mediated by recombination between Alu elements. Am J Hum Genet. 79:41–53. doi: 10.1086/504600. Shimoda N., Toyoda-Yamamoto A., Aoki S. and Machida Y. (1990b) Genetic evidence for an interaction between the VirA sensor protein and the ChvE

182

References sugar binding protein of Agrobacterium tumefaciens. Journal of Biological Chemistry 268:26552-26558. Shimoda N., Toyoda-Yamamoto A., Nagamine J., Usami S., Katayama M., Sakagami Y. and Machida Y. (1990a) Control of expression of Agrobacterium tumefaciens genes by synergistic actions of phenolic signal molecules and monosaccharides. Proceedings of the National Academy of Sciences of the USA 87:6684-6688. Shirasu K. and Kado C.I. (1993a) The virB operon of the Agrobacterium tumefaciens virulence regulon has sequence similarities to B,C, and D open reading frames downstream of the Pertussis toxin-operon and to the DNA transfer-operons of broad-host-range conjugative plasmids. Nucleic Acid Research 21:353-354. Shirasu K. and Kado C.I. (1993b) Membrane location of the Ti plasmid VirB proteins involved in the biosynthesis of a pilin-like conjugative structure on Agrobacterium tumefaciens. FEMS Microbiology Letters 111:287-294. Shirasu K., Koukolikova-Nicola Z., Hohn B. and Kado C.I. (1994) An innermembrane-associated virulence protein essential for T-DNA transfer from Agrobacterium tumefacien to plants exhibits ATPase activity and similarities to conjugative transfer genes. Molecular Microbiology 11:581-588. Shirasu K., Morel P. and Kado C.I. (1990) Characterisation of the virB operon of an Agrobacterium tumefaciens Ti plasmid: nucleotide sequence and protein analysis. Molecular Microbiology 4:1153-1163. Shizuya, H., Birren, B., Kim, U.-J., Mancino, V., Slepak, T., Tachiiri, Y. and Simon, M. (1992) Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. Proc. Natl. Acad. Sci. USA, 89, 8794-8797. Shurvinton C.E., Hodges L. and Ream W. (1992) A nuclear localisation signal and the C-terminal omega sequence in the Agrobacterium tumefaciens VirD2 endonuclease are important for tumour formation. Proceedings of the National Academy of Sciences of the USA 89:11837-11841. Simpson, EC et al. (1999) Gene flow in genetically modified herbicide tolerant oilseed rape (Brassica napus) in the UK. Gene Flow and Agriculture:

183

References Relevance for Transgenic Crops. 1999 BCC Symposium Proceedings No. 72 pp 75-81. Spudich G.M., Fernandez D., Zhou X.R. and Christie P.J. (1996) Intermolecular disulfide bonds stabilise VirB7 homodimmers and VirB7/VirB9 heterodimmers during biogenesis of the Agrobacterium tumefaciens T-complex transport apparatus. Proceedings of the National Academy of Sciences of the USA 93:7512-7517. Starlinger, P. Plasmid 3, 241 (1980); and Calos, H. and Miller, J. H., Cell 20, 579. Stephens K.M., Roush C. and Nester E.W. (1995) Agrobacterium tumefaciens VirB11 protein requires a consensus nucleotide-binding site for function in virulence. Journal of Bacteriology 177:27-36. Sternberg, N. (1990) Bacteriophage P1 cloning system for the isolation, amplification, and recovery of DNA fragments as large as 100 kilobase pairs. Proc. Natl. Acad. Sci. USA87:103-107.

Sternberg, N., D. Tiemeier, and L. Enquist. (1977) In vitro packaging of Dam vector containing EcoRI DNA fragments of Escherichia coli and phage P1. Gene 1:255-280. Sundberg C., Meek L., Carroll K., Das A. and Ream W. (1996) VirE1 protein mediates export of the single-stranded DNA binding protein VirE2 from Agrobacterium tumefaciens into plant cells. Journal of Bacteriology 178:12071212. Surgeoner, G.A. and Roberts, W. (1993) In The Pesticide Question: Environment, Economics and Ethics; D. Pimentel and H. Lehman (eds.), Chapman and Hall, New York. Tacket, C. O., Mason, H. S., Losonsky, G., Clements, J. D., Levine, M. M. and Arntzen, C. J. (1998) Nature Med., 4, 607–609. Tavladoraki, P., Benvenuto, E., Trinca, S., De Martinis, D., Cattaneo, A. and Galeffi, P. (1993) Nature, 366, 469–472.

184

References Thomas, M., J. R. Cameron, and R. W. Davis. (1974) Viable molecular hybrids of bacteriophage lambda and eukaryotic DNA. Proc. Natl. Acad. Sci. USA 71:4579-4583. Thomashow M.F., Karlinsey J.E., Marks J.R. and Hurlbert R.E. (1987) Identification of a new virulence locus in Agrobacterium tumefaciens that affects polysaccharide composition and plant attachment. Journal of Bacteriology 169:3209-3216. Thompson D.V., Melchers L.S., Idler K.B., Schilperoort R.A. and Hooykaas P.J.J. (1988) Analysis of the complete nucleotide sequence of the Agrobacterium tumefaciens virB operon. Nucleic Acids Research 16:46214636. Thompson, CE et al. (1999) Regional patterns of gene flow and its consequence for GM oilseed rape. Gene Flow and Agriculture: Relevance for Transgenic Crops. 1999 BCC Symposium Proceedings No 72 pp 95-100 Tinland B., Schoumacher F., Gloeckler V., Bravo Angel A.M. and Hohn B. (1995) The Agrobacterium tumefaciens virulence D2 protein is responsible for precise integration of T-DNA into the plant genome. EMBO Journal 14:35853595. Tomkins, J.P., Mahalingham, R., Miller-Smith, H., Goicoechea, J.L., Knapp, H.T. and Wing, R.A. (1999a) A soybean bacterial artificial chromosome library for PI 437654 and the identification of clones associated with cyst nematode resistance. Plant Mol. Biol., 41, 25-32. Toro N., Datta A., Carmi O.A., Young C., Prusti R.K. and Nester E.W. (1989) The Agrobacterium tumefaciens virC1 gene products binds to overdrive, a T-DNA transfer enhancer. Journal of Bacteriology 171:6845-6849. Tricoli DM, Camey K!, Quemada H, et al. (l992) Transgenic squash plants exhibit protein mediated protection under field conditions. J Cell Biochem Suppl .l6:222(abstr). Turk S.C.H.J., van Lange R.P., Sonneveld E. and Hooykaas P.J.J. (1993) The chimeric VirA-Tar receptor protein is locked into highly responsive state. Journal of Bacteriology 175:5706-5709.

185

References Turner NE, O’Connell KM. Nelson RS, et al. (1987) Expression of alfalfa mosaic virus coat protein gene confers cross-protection in transgemc tobacco and tomato plants. EMBO J;6: I 181-8. Van Haaren M.J.J., Pronk J.T., Schilperoort R.A. and Hooykaas P.J.J. (1987) Functional analysis of the Agrobacterium tumefaciens octopine Ti-plasmid left and right T-Region border fragments. Plant Molecular Biology 8:95-104. Van Weizenbeck, P. M. G. F., T. J. M. Hulsebos, and J. G. G. Schoenmakers. (1980) Nucleotide sequence of the filamentous bacteriophage M13 DNA genome: comparison with phage fd. Gene 11:129-138. Venter, J.C., Smith, H.O. and Hood, L. (1996) A new strategy for genome sequencing. Nature, 381,364-366. Vinatzer, B.A., Zhang, H.-B. and Sansavini, S. (1998) Construction and characterization of a bacterial artificial chromosome library of apple. Theor. Appl. Genet., 97, 1183-1190. Vitamin A Global Initiative (1997). A Strategy for Acceleration of Progress in Combating Vitamin A Deficiency. Volff JN. (2006) Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes. Bioessays.;28:913–922. doi: 10.1002/bies.20452. Wang Y, Chen B, Hu Y, Li J, Lin Z. (2005) Inducible excision of selectable marker gene from transgenic plants by the Cre/lox site-specific recombination system. Transgenic Res 14: 605–614. Ward J.E., Akiyoshi D.E., Regier D., Datta A., Gordon N.P. and Nester E.W. (1988) Characterisation of the virB operon from an Agrobacterium tumefaciens Ti plasmid. Journal of Biological Chemistry 265:4768. Weigle, J. (1968) Studies on head-tail union in bacteriophage lambda. J. Mol. Biol. 33:483-489. Whatley M.H. and Spress L.D. (1977) Role of bacterial lipopolysaccharide in attachment of Agrobacterium to moss. Plant Physiology 60:765-766. Willetts, N. and Skurray, R. (1987) Structure and function of the F factor and mechanism of conjugation. In Neidhardt, F.C. (ed.), Escherichia coli and 186

References Salmonella typhimurium: Cellular and Molecular Biology. American Society for Microbiology, Washington, D.C., Vol. 2, pp. 1110-1133. Wilson, PJ, Boatman, ND and Edwards PJ. (1990) Strategies for the conservation of endangered arable weeds in Great Britain. Proceedings of the European Weed Research Society Symposium 1990: Integrated Weed Management in Cereals pp 93-100. Winans S.C. (1992) Two-way chemical signalling in Agrobacterium-plant interactions. Microbiology Reviews 56:12-31. Woo, S.-S., Jiang, J., Gill, B.S., Paterson, A.H. and Wing, R.A. (1994) Construction and characterization of a bacterial artificial chromosome library of Sorghum bicolor. Nucleic Acids Res., 22, 4922-4931. WVindle, B. E. (1986) Phage lambda and plasmid vectors with multiple cloning sites and lacZ-a-complementation. Gene 45: 95-99. Yadav NS, Vanderleyden J, Bennett DR, Barnes WM, Chilton MD. (1982) Short direct repeats flank the T-DNA on a nopaline Ti plasmid. Proc Natl Acad Sci USA 79: 6322–6326. Yang, D., Parco, A., Nandi, S., Subudhi, P., Zhu, Y., Wang, G. and Huang, N. (1997) Construction of a bacterial artificial chromosome (BAC) library and identification of overlapping BAC clones with chromosome 4-specific RFLP markers in rice. Theor. Appl. Genet., 95, 1147-1154. Yanisch-Perron, C., Vieira, J. and Messing, J. (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors, Gene 33, 103-119. Young, R. A., and R. W. Davis. (1983) Efficient isolation of genes by using antibody probes. Proc. Natl. Acad. Sci. USA 80:1194-1198. Young, R. A., and R. W. Davis. (1985) Immunoscreening of recombinant DNA expression librariesIn J. K. Setlow and A. Hallaender (ed.), Genetic engineering, vol.7.IRL Press, Oxford 29-41. Zagursky, R. J., and M. L. Berman. (1984) Cloning vectors that yield high levels of single-stranded DNA for rapid DNA sequencing. Gene 27:183-191.

187

References Zeitlin, L., Olmsted, S. S., Moench, T. R., Co, M. S., Martinell, B. J., Paradkar, V. M., Russell, D. R., Queen, C., Cone, R. A. and Whaley, K. J.( 1998) Nature Biotechnol., 16, 1361–1364. Zhang W, McElroy D, Wu R. (1991) Analysis of rice Act1 5' region activity in transgenic rice plants. Plant Cell 3: 1155–1165. Zhang, H.B., Choi, S., Woo, S.-S., Li, Z. and Wing, R.A. (1996) Construction and characterization of two rice bacterial artificial chromosome libraries from the parents of a permanent recombinant inbred mapping population. Mol. Breeding, 2, 11-24. Zhao ZY, Gu W, Cai T, Tagliani L, Hondred D, Bond D, Shroeder S, Rudert M, Pierce D. (2001) High throughput genetic transformation mediated by Agrobacterium tumefaciens in maize. Mol Breed 8: 323–333. Zhou X.R. and Christie P.J. (1997) Suppression of mutant phenotypes of the Agrobacterium tumefaciens VcirB11 ATPase by overproduction of VirB proteins. Journal of Bacteriology 179:5835-5842. Zupan J.R. and Zambryski P.C. (1995) Transfer of T-DNA from Agrobacterium to the plant cell. Plant Physiology 107:1041.1047. Zupan J.R., Citovsky V. and Zambryski P.C. (1996) Agrobacterium VirE2 protein mediates nuclear uptake of single-stranded DNA in plant cells. Proceedings of the National Academy of Sciences of the USA 93:2392-2397.

188

Related Documents

Reference
November 2019 34
Reference
May 2020 23
Reference
December 2019 33
Reference
June 2020 21
Reference
November 2019 27
Reference
May 2020 12