SHORT QUIZ
After the lecture Closed notes ¼ piece of paper
Pathology - Diseases
Non-Infectious Diseases
Inflammatory Vascular Tumor
Infectious Diseases
By an infectious agent Microorganism Microbiology
Microbiology Edgel May C. Bayag, M.D.
Microbial Groups
Prions Proteins Viruses Nucleic Acids (DNA & RNA)
Prokaryotes
Bacteria
Eukaryotes
Fungi Parasites
Prions
Noncellular infectious proteins Naked proteins with the same amino acid sequence as certain normal cellular proteins, but are folded differently Subacute Spongiform Encephalopathies
Creutzfelt-Jakob Disease
Cannibalism
Prion Gains Entry into Human Cells
Modify the folding of normal PrPc
Turn proteins into additional prions
Eventually neurologic degeneration
Prions Sites of Replication & Transport
Viruses
Obligate intracellular organisms
Noncellular
take over host cells use the viral nucleic acid to direct the synthesis and assembly of viral components make new virus
RNA or DNA
cannot be grown outside host cell
various proteins
Envelope
may or may not have
Viral Structure
Viral Genomes
Proteins
Structural and Enzymes
Viral Nucleocapsid (Genomic nucleic acid + proteins)
DNA or RNA
Icosahedral or Helical
Naked or Enveloped
(host’s membrane as an envelope)
Viral Replication
Infection thru Viral Binding Early Macromolecular Synthesis Replication of Genome Assembly Release
Bacteria
Prokaryotic cells Complex cell walls of peptidoglycan (except for Mycoplasmas) No sterols (except in Mycoplasma membranes) Divide asexually or binary fission
Staining Property & Cell-Envelope Features:
Gram Positive Gram Negative Poorly or Non-Gram Staining (Acid fast, Obligate Intracellular, No peptidoglycan, Weakly GramNegative)
Shapes
Coccus
Bacillus
round rod
Spirilla Spirochetes
spiral-shaped Thin Do not show up well in light microscopy
O2 requirement: Aerobes and Anaerobes (aerobic respiration or fermentation)
Obligate aerobes (Tube1)
Anaerobes (ABCs) (Tube2)
Grow better with O2
Microaerophilic bacteria (Tube4)
Actinomyces Bacteroides Clostridium
Facultative anaerobes (Tube3)
aerobic respiration
require O2 at low levels
Aerotolerant Anaerobe (Tube5)
Do not need O2 for Growth
Pathogens vs Commensals
Disease-causing bacteria
pathogens or parasites
Commensals
normal flora colonizes the human body’s internal and external surfaces low virulence kept in balance by our surface defense mechanisms
Normal Flora
1. Reduce the risk of pathogen colonization
modifying pH blocking binding sites producing antibacterial compounds (bacteriocins)
2. Infection from normal flora
carried into normally sterile tissues (trauma) immunocompromised patients
BACTER Skin IUM
Conjunctiva
Nose
Pharynx Mouth
Lower GI
Ant. ure- Vagina thra
Staphylococcus epidermidis (1)
++
+
++
++
++
+
++
++
Staphylococcus aureus* (2)
+
+/-
+
+
+
++
+/-
+
Streptococcus mitis
+
++
+/-
+
+
Streptococcus salivarius
++
++
Streptococcus mutans* (3)
+
++
Enterococcus faecalis* (4)
+/-
+
++
+
+
+
+
+
+
+
++
+
+
++
+
+/-
+/-
+
Streptococcus pneumoniae* (5) Streptococcus pyogenes* (6) Neisseria sp. (7)
+/+/-
+/+
Neisseria meningitidis* (8) Enterobacteria ceae*(Escheric hia coli) (9)
+/-
+/-
++ = nearly 100 percent +/- = rare (less than 5%)
+/+/-
+/+
+ +
++
+
+ = common (about 25 percent) * = potential pathogen
+
BACTER Skin IUM
Conjunctiva
Nose
Pharynx Mouth
Lower GI
Ant. ure- Vagina thra
Proteus sp.
+/-
+
+ +/-
+ +/-
+ +
+ +/-
+
+/-
+
+
+
Bacteroides sp.*
++
+
+/-
Bifidobacteriu m bifidum (12)
++
Pseudomonas aeruginosa* (10) Haemophilus influenzae* (11)
+
Lactobacillus sp. (13) Clostridium sp.* (14)
++
++
+/-
++
Clostridium tetani (15)
++
+/-
Corynebacteri a (16)
++
Mycobacteria
+
+
++
+
+/-
+/+ + +
Actinomycetes Spirochetes Mycoplasmas
++ = nearly 100 percent +/- = rare (less than 5%)
+ + ++ +
+
+
+
+
++ +
+/-
+ = common (about 25 percent) * = potential pathogen
+
+
Pathogenicity
a. Survival in the Environment b. Colonization of the human body
By normal flora & pathogens
c. Traumatic implantation into the human host d. Evasion of the Immediate host defense system e. Production of toxins f. Intracellular Growth
Fungi
Eukaryotic organisms Complex carbohydrate cell walls
chitin, glucans, and mannans
Fungal membranes
Ergosterol as the major sterol treatment with
imidazoles polyene drugs
Yeasts Filamentous molds Dimorphic fungi Mushrooms
Structures
Hyphae (filamentous cells) Yeasts (oval to spherical cells replicate by budding) Dimorphic fungi (cold/mold yeast in body) Pseudohyphae (buds remain attached and elongate look like hyphae with constrictions at each cell-cell juncture)
Parasites
Eukaryotic cells Protozoans, Worms, and Insects
Sterols in their cell membranes
Live on other organisms
do not have cell walls
Organism that lives in or on another organism (the host) Does some damage to the host in the process
Types of Parasites
Facultative
Obligate
can live in association with its host or separately cannot live free of the host for at least some stage of the life cycle
With Complex Life Cycle
requires more than one host
Hosts: organisms that provide nutrition and place for the parasite to replicate
Reservoir host – maintains a parasite and may be the source for human infection. An essential reservoir host is one without which the parasite cannot exist
Intermediate host – either maintains the asexual stages of a parasite or allows development of the parasite to proceed only to the larval stage
Definitive host – which the adult or sexual parasites develop
Vectors: biological systems that spread parasites
Biological vector
vector and host for the replicative stage of a parasite Anopheles mosquito in malaria
Mechanical vector
transmits parasite without being a host flies “tracking” Chlamydia trachomatis from one eye to the next)
Major Groups
Protozoa
Roundworms
Amebas, Flagellates, Plasmodium Ascaris, Enterobius
Flatworms
Flukes, Tapeworms
Quiz
1-5. What are the 5 major microbial groups that cause infectious diseases?
6.Which of the microbial groups are noncellular infectious proteins?
7. Which among the microbial groups are obligate intracellular organisms with either DNA or RNA as their genome?
8. What component of the prokaryotic cell wall that determines whether it is gram positive or negative?
9. What is the sterol that composes the fungal membrane?
10. What is the biological system that spread parasites?
Infectious Diseases Edgel May C. Bayag, M.D.
By Organ System
Eye and Ear Infections Respiratory Tract Infections Nervous System Infections Gastrointestinal and Hepatobiliary Diseases Cardiovascular Infections and Septicemia Bone or Joint Infections Genitourinary Tract Infections Cancers with Infections Skin and Subcutaneous Infections
1. Eye and Ear Infections
Stye (hordeolum)
Conjuctivitis
S.aureus (red eye)
Acute otitis media
2. Respiratory Tract Infections
Upper Respiratory Tract Infection, Bronchitis, Pneumonia
Pneumonia
3. Nervous System Infections
Meningitis, Brain Abscesses, Encephalitis, Neurotoxins by microbes, Prion disease
4. Gastrointestinal and Hepatobiliary Disease
Vomiting and Diarrhea by Ingestion of Microbial Toxin Noninflammatory Diarrhea (Virus) Inflammatory diarrhea and dysentery (Ameba) Hepatobiliary Disease (Ascaris, Schistosoma)
Dehydration in Diarrhea & Vomiting
5. Cardiovascular Infections; Septicemias; and Blood Cell Changes in Infection
Native valve endocarditis, Pericarditis, Myocarditis Septicemia & Shock
6. Bone or Joint Infections
Septic Arthritis, Osteomyelitis
7. Genitourinary Tract Infections
Cystitis Blood in Urine Reproductive Tract Infections
8. Skin and Subcutaneous Infections; Rashes
Surgical wounds or carbuncles, Furuncles Dermatitis, Impetigo, Tetatus Infection, Cellulitis Rash Chickenpox Measles Shingles Scarlet fever Slapped cheek fever Exanthem subitum Neisseria meningitidis (meningococcemia and meningitis)
Tetanus
Furuncle
Carbuncle
Dermatitis
Measles (Rubeola)
Slapped-Cheek Rash
Scarlet Fever Rash
Chickenpox (Varicella Zoster)
Shingles (Herpes Zoster)
Exanthem Subitum (Roseola)
Meningococcemia
9. Cancers Associated with Infections
Viruses
Cervical Ca – HPV Burkitts lymphoma – EBV Liver ca – Hepa B&C Human T-cell Leukemias or lymphomas – HTLV
Parasites
Bladder Ca – Schistosoma hematobium Burkitt’s Lymphoma - Plasmodium
Disease Patterns & Transmission Edgel May C. Bayag, M.D.
Disease Patterns
Acute
Chronic
Short and sharp course
Long duration and slow progression
Latent
Not manifest but potentially discernible Period of apparent inactivity From the time stimulus is presented until a response occurs
Transmitted in two ways
Horizontal disease transmission
one individual to another in the same generation peers in the same age group
direct contact (licking, touching, biting) indirect contact (vectors or fomites without physical contact)
Vertical disease transmission
from parent to offspring mother transmits the disease bodily fluid, breast milk
Disease Transmission
Droplet contact
Direct physical contact
coughing or sneezing on another person
touching an infected person, including sexual contact
Indirect contact
touching soil contamination or a contaminated surface
Disease Transmission
Airborne transmission
Fecal-oral transmission
microorganism remain in the air for long periods
contaminated food or water sources
Vector borne transmission
insects or other animals
Locus Point on the body where a pathogen enters
Droplet contact and other Airborne transmission
Direct physical and Indirect contact
wound in the skin mucous membrane
Fecal-oral transmission
respiratory system
mouth
Vector borne transmission
bite or sting of the vector
Diseases by Droplet Contact
Bacterial Meningitis Chickenpox Common cold Influenza Mumps Strep throat Tuberculosis Measles Rubella Whooping cough
Diseases by Viral Droplet Nuclei
Common cold Influenza A & B Mumps Measles Rubella SARS
Viral Droplet Nuclei
When viruses are shed by an infected person through coughing or sneezing into the air, the mucus coating on the virus starts to evaporate Once this mucus shell evaporates the remaining virion is called a droplet nucleus or quanta
Diseases via Fecal-Oral Transmission
Cholera Hepatitis A Polio Rotavirus Salmonellosis
Fecal-Oral Transmission
Direct contact is rare in this route, for humans at least. More common are the indirect routes;
foodstuffs or water become contaminated (by people not washing their hands before preparing food, or untreated sewage being released into a drinking water supply) the people who eat and drink them become infected
Diseases thru Sexual Transmission
HIV/AIDS Chlamydia Genital warts Gonorrhea Hepatitis B Syphilis
Sexual Transmission
Disease that can be caught during sexual activity with another person, including vaginal or anal sex or (less commonly) through oral sex
Diseases thru Oral Sexual Transmission
HIV Herpes Simplex Virus 1
Diseases thru Oral Transmission
Cytomegalovirus infections Herpes simplex virus (especially HSV-1) Infectious mononucleosis
Diseases by Direct Contact
Athlete's foot Impetigo Syphilis Warts
Transmission by Direct Contact
Diseases that can be transmitted by direct contact are called contagious Contagious is not the same as Infectious All contagious diseases are infectious, Not all infectious diseases are contagious
Diseases by Vertical Transmission
HIV Hepatitis B Syphilis
Vertical Transmission
This is from mother to child, often in utero, as a result of the incidental exchange of bodily fluids (mostly blood) during childbirth or (rarely) through breast milk.
Diseases by Iatrogenic Transmission
Creutzfeldt-Jakob Disease
Injection of contaminated human growth hormone
MRSA infection
Acquired as a result of a stay in hospital
Iatrogenic Transmission
Transmission due to medical procedures, such as injection or transplantation of infected material. Some diseases that can be transmitted iatrogenically include:
Diseases by Vector-borne Transmission
Dengue Malaria
Vector borne transmission
A vector is an organism that does not cause disease itself but that transmits infection by conveying pathogens from one host to another
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