Chapter 4 - 5 Vocabulary

Bassir Caravan

Vocabulary Chapter 4 adenosine triphosphate (ATP): An adenine-containing nucleoside triphosphate that releases free energy when its phosphate bonds are hydrolyzed. This energy is used to drive endergonic reactions in cells. amino group: A functional group that consists of a nitrogen atom bonded to two hydrogen atoms; can act as a base in solution, accepting a hydrogen ion and acquiring a charge of +1. carbonyl group: A functional group present in aldehydes and ketones and consisting of a carbon atom double-bonded to an oxygen atom. carboxyl group: A functional group present in organic acids and consisting of a single carbon atom double-bonded to an oxygen atom and also bonded to a hydroxyl group. Enantiomer: One of two molecules that are mirror images of each other. functional group: A specific configuration of atoms commonly attached to the carbon skeletons of organic molecules and usually involved in chemical reactions. geometric isomer: One of several organic compounds that have the same molecular formula but differ in the spatial arrangements of their atoms. Hydrocarbon: An organic molecule consisting only of carbon and hydrogen. hydroxyl group: A functional group consisting of a hydrogen atom joined to an oxygen atom by a polar covalent bond. Molecules possessing this group are soluble in water and are called alcohols. organic chemistry: The study of carbon compounds (organic compounds). phosphate group: P bonded to four oxygen atoms, one bonded to the carbon skeleton and one is double-bonded, a functional group important in energy transfer, makes the molecule of which it is part of negatively charged (anion) structural isomer: One of several organic compounds that have the same molecular formula but differ in the covalent arrangements of their atoms. sulfhydryl group: A functional group consisting of a sulfur atom bonded to a hydrogen atom (-SH), two sulfhydryl groups can interact to stabilize protein structure Vocabulary Chapter 5 Antiparallel: the opposite arrangement of the sugar-phosphate backbones in a DNA doublehelix Carbohydrates: A sugar (monosaccharide) or one of its dimers (disaccharides) or polymers (polysaccharides). Catalyst: A chemical agent that changes the rate of a reaction without being consumed by the reaction. Cellulose: A structural polysaccharide of cell walls, consisting of glucose monomers joined by β-1, 4-glycosidic linkages. Chaperonin: A protein molecule that assists the proper folding of other proteins. Chitin: A structural polysaccharide of an amino sugar found in many fungi and in the exoskeletons of all arthropods. Cholesterol: A steroid that forms an essential component of animal cell membranes and acts as a precursor molecule for the synthesis of other biologically important steroids. Denaturation: In proteins, a process in which a protein unravels and loses its native conformation, thereby becoming biologically inactive. In DNA, the separation of the two strands of the double helix. Denaturation occurs under extreme conditions of pH, salt concentration, and temperature.

Bassir Caravan

Macromolecule: A giant molecule formed by the joining of smaller molecules, usually by a condensation reaction. Polysaccharides, proteins, and nucleic acids are macromolecules. Monomer: The subunit that serves as the building block of a polymer. Polymer: A long molecule consisting of many similar or identical monomers linked together. Polypeptide: A polymer (chain) of many amino acids linked together by peptide bonds. Polysaccharide: A polymer of up to over a thousand monosaccharides, formed by dehydration reactions. Protein: A three-dimensional biological polymer constructed from a set of 20 different monomers called amino acids. Purine: One of two types of nitrogenous bases found in nucleotides. Adenine (A) and guanine (G) are purines. Pyrimidine: One of two types of nitrogenous bases found in nucleotides. Cytosine (C), thymine (T), and uracil (U) are pyrimidines. Ribose: The sugar component of RNA. Starch: A storage polysaccharide in plants consisting entirely of glucose. Steroid: A type of lipid characterized by a carbon skeleton consisting of four rings with various functional groups attached. X – ray crystallography: A technique that depends on the diffraction of an X-ray beam by the individual atoms of a molecule to study the three-dimensional structure of the molecule. alpha (α) helix: a spiral shape constituting one form of the secondary structure of proteins, arising from a specific hydrogen bonding structure amino acid: an organic molecule processing both carboxyl and amino groups. Amino acids serve as monomers of proteins. beta (β) pleated sheets: one form of the secondary structure of proteins in which the polypeptide chain folds back and forth. Two regions of the chain lie parallel to each other and are held together by hydrogen bonds. condensation reaction: A reaction in which two molecules become covalently bonded to each other through the loss of a small molecule, usually water; also called a dehydration reaction. dehydration reaction: A chemical reaction in which two molecules covalently bond to each other with the removal of a water molecule. deoxyribonucleic acid (DNA): A double-stranded, helical nucleic acid molecule capable of replicating and determining the inherited structure of a cellʼs proteins. Deoxyribose: The sugar component of DNA, having one less hydroxyl group than ribose, the sugar component of RNA. Disaccharide: A double sugar, consisting of two monosaccharides joined by dehydration synthesis. disulfide bridge: A strong covalent bond formed when the sulfur of one cysteine monomer bonds to the sulfur of another cysteine monomer. double helix: The form of native DNA, referring to its two adjacent polynucleotide strands wound into a spiral shape. Enzyme: A protein serving as a catalyst, a chemical agent that changes the rate of a reaction without being consumed by the reaction. Fat: A biological compound consisting of three fatty acids linked to one glycerol molecule. fatty acid: A long carbon chain carboxylic acid. Fatty acids vary in length and in the number and location of double bonds; three fatty acids linked to a glycerol molecule form fat.

Bassir Caravan

Gene: A discrete unit of hereditary information consisting of a specific nucleotide sequence in DNA (or RNA, in some viruses). Glycogen: An extensively branched glucose storage polysaccharide found in the liver and muscle of animals; the animal equivalent of starch. glycosidic linkage: A covalent bond formed between two monosaccharides by a dehydration reaction. Hydrolysis: A chemical process that lyses, or splits, molecules by the addition of water. hydrophobic interaction: A type of weak chemical bond formed when molecules that do not mix with water coalesce to exclude the water. Lipid: One of a family of compounds, including fats, phospholipids, and steroids, that are insoluble in water. Monosaccharide: The simplest carbohydrate, active alone or serving as a monomer for disaccharides and polysaccharides. Also known as simple sugars, the molecular formulas of monosaccharides are generally some multiple of CH2O. nucleic acid: A polymer (polynucleotide) consisting of many nucleotide monomers; serves as a blueprint for proteins and, through the actions of proteins, for all cellular activities. The two types are DNA and RNA. Nucleotide: Ahe building block of a nucleic acid, consisting of a five-carbon sugar covalently bonded to a nitrogenous base and a phosphate group. peptide bond: The covalent bond between two amino acid units, formed by a dehydration reaction. Phospholipids: A molecule that is a constituent of the inner bilayer of biological membranes, having a polar, hydrophilic head and a nonpolar, hydrophobic tail. Polynucleotide: A polymer consisting of many nucleotide monomers; serves as a blueprint for proteins and, through the actions of proteins, for all cellular activities. The two types are DNA and RNA. primary structure: The level of protein structure referring to the specific sequence of amino acids. quaternary structure: The particular shape of a complex, aggregate protein, defined by the characteristic three-dimensional arrangement of its constituent subunits, each a polypeptide. ribonucleic acid: A type of nucleic acid consisting of nucleotide monomers with a ribose sugar and the nitrogenous bases adenine (A), cytosine (C), guanine (G), and uracil (U); usually singlestranded; functions in protein synthesis and as the genome of some viruses. saturated fatty acid: A fatty acid in which all carbons in the hydrocarbon tail are connected by single bonds, thus maximizing the number of hydrogen atoms that can attach to the carbon skeleton. secondary structure: The localized, repetitive coiling or folding of the polypeptide backbone of a protein due to hydrogen bond formation between peptide linkages. tertiary structure: Irregular contortions of a protein molecule due to interactions of side chains involved in hydrophobic interactions, ionic bonds, hydrogen bonds, and disulfide bridges. Triacylglycerol: Three fatty acids linked to one glycerol molecule. unsaturated fatty acid: A fatty acid possessing one or more double bonds between the carbons in the hydrocarbon tail. Such bonding reduces the number of hydrogen atoms attached to the carbon skeleton.