Asian Journal of Spectroscopy, 11,3&4, 2007, 169-172 Spectroscopic and Intra Molecular Studies of Pharmaceutically Important Benzoic Acid and its Amino Substitutents Y.P.Singha, R.A.Singhb and Ratnesh Dasc a
Department of Physics, Govt. Women’s Polytechnic College, Sagar (MP), INDIA 470001.E-mail:
[email protected] b Department of Physics, Dr. H.S.Gour University, Sagar (MP), INDIA, 470001 c Department of Chemistry, Dr. H.S.Gour University, Sagar (MP), INDIA, 470001, E-mail:
[email protected] ABSTRACT The vibrational absorption spectra of Benzoic Acid’s Monomer molecules and its amino substitutents have been studied using GF matrix and AM1 method. Assuming C s point symmetry, vibrational assignments for the observed frequencies have been proposed. The spectra exhibit distinct features originating from low frequency vibrational modes caused by intra-molecular motion. Normal modes have been calculated and an assignment of the observed spectra has been proposed. Experimental frequencies are compared with those obtained by G.F.Matrix and AM1 method. Keywords : Benzoic Acid,o-, m-, p- Amino Benzoic Acid, FTIR Spectra, AM1, G.F.Matrix INTRODUCTION Carboxylic
acids (RCOOH) are a common and important functional group and provide
the point of success to the carboxylic acids derivatives (acetyl chlorides, esters, amides etc.) and therefore, it has been extensively studied by spectroscopic methods. Spectroscopist's interest has been concerned with structure and vibrational frequencies. The aim of the present study is a IR spectroscopic analysis of Benzoic Acid (BA), which have found considerable attention in the literature1-8. We compared experimental results with calculated frequencies of BA using force matrix method and AM1, PM3 and G.F. Matrix method. These methods were able to account breadth of spectrum as well as description of vibrational modes to encourage the application of a similar procedure to a larger and more complex group.
STRUCTURE AND GEOMETRY OF BENZOIC ACID Benzene derivatives containing a carboxylic or amino group possess C 1 symmetry. From aniline and toluene, the geometry parameters were transferred. Cartesian coordinates of the molecules under investigation were calculated on the basis of geometrical parameters as shown in Table 1 EXPERIMENTAL Benzoic acid was purchased from Sigma Chemical Co (USA). Benzoic acid forms a white to off white crystalline powder with melting point of 159 c. I.R.
Spectrum
has
been
recorded in the liquid phase in the range 400-4000cm-1 on Perkin-Elmer spectrometer Model 397. Preparation of KBr Pallets: A small amount of finally grounded solid sample was intimately mixed with about 100 times or more than its weight of Potassium bromide powder. The finally grounded mixture was than pressed under very high pressure in a press (about 10/cm2) to form a small pallet (about 1-2 mm thick and 1cm in diameter). The accuracy of the measurements was estimated to be within 3cm-1 and the resolution was better than 2cm-1 through the entire range for both the spectra. COMPUTATIONAL AND THEORETICAL DETAILS In noncomplex molecules, the G F Matrix 9 is given by:G tt’= Σ3Ni=1 (B ti B t’i’) 1/ mi
where t, t’ = 1,2,3,……, 3N-6
In which mi is the mass of the atom to which the subscript I refers and Bti , Bt’i’ are constants determined by geometry of molecule. Internal coordinate St are related with Cartesian displacement coordinate ξi as : St = Σ 3Ni=1 Bti ξi
where t = 1,2,3….., 3N-6
On solving G.F. matrix for any atom α is obtained as: G tt’= Σ3N α =1 μ α St α . St’ α Where dot represents the scalar product of two vectors and μ α = 1/m α , the reciprocal of the mass of atom α The AM1 program
10
semi empirical approaches was performed as implemented in MOPAC
and the PRECISE keywords were used. We have transformed the harmonic force
fields, determined initially in the Cartesian coordinates, were transformed to the force fields in
the internal local coordinates. The force fields obtained were used to calculate the potential energy distribution (PED)11. Contributions greater than 10% are given. RESULTS and DISCUSSIONS We had employed a very large basis set for the computational of the frequencies. First infrared frequencies were calculated for the BA ( Cs Symmetry) at the AM1 and G F Matrix level of theory. We can get information from computational vibrational spectra only when we compare it with experimental spectrum.Our results are given in table 2. Due to anharmonicity, the harmonic vibrational frequencies were found to be lowered by1 to 3% in GF Matrix method except AM1 method. Benzoic acid contains 15 atoms so that it has 39 normal modes. The calculated normal modes are distributed among 27 a΄ and 12 a΄΄ species of Cs symmetry group. The table 2 also shows that PED contributions for 39 normal modes. These assignments are partly based on the calculated frequencies. As the table 2 is self-explanatory, we shall discuss here only some important points. OH Stretch: Experimental OH stretch band frequency for BA is 3507 cm −1 which was shifted by 97 cm −1 as reported by Antony et al13 and which is also higher than those observed by others7,16. Theoretically calculated frequencies by G.F. and AM1 are 3579.2 cm −1 and 3627.6 cm −1
, respectively.
CH3 s-stretch: As presented in table2, experimental CH3 s-stretch frequency for BA is 2987 cm −1
. Antony et al13 observed this frequency for benzoic acid at 2943 cm −1 . Calculated frequencies
by G.F. and AM1 are 3010.9 cm −1 and 3172.0 cm −1 respectively. C=O stretch: experimental observed frequencies for this bands is 1823 cm −1 for BA, which is higher than the calculated frequencies . Antony et al13 observed this frequency for benzoic acid at 1752 cm −1 . Theoretically calculated frequencies by G.F. and AM1 are 1716.5 cm −1 and 1726.2 cm −1 respectively. O-H Bend: Our observations for this bend is 1328BA. Antony et al13 observed this frequency for benzoic acid at 1381 cm −1 . Trout et al observed 1328 frequency for COO symmetric stretch, so our assignment was totally reversed by this one. Computationally calculated frequencies by G.F. and AM1 are 1311.5 cm −1 and 1441.9 cm −1 respectively.
C-O stretch: Experimental frequency for BA is 1228 cm −1 respectively. Antony et al13 did not observed this frequency for benzoic acid. Theoretically calculated frequencies by G.F. and AM1 are 1243.8 cm −1 and 1435.7 cm −1 respectively. O-C-O Deformation: We observed this bend frequency at 668 cm −1 for BA respectively which is comparative to others14,16 . Theoretically calculated frequencies by G.F. and AM1 are 657.7 cm −1 and 646.3 cm −1 respectively. Torsion: Experimental observed frequency for this bend for BA is 591 cm −1 . Antony et al15 observed this frequency for benzoic acid at 444 cm −1 . Computationally calculated frequencies by G.F. and AM1 are 593.4 cm −1 and 571.9 cm −1 respectively. NH 2 Group Modes The number of internal vibrations for a group is given by 3m-3, where m is the number of atoms in the group. Thus NH 2 has 6 modes of vibrations. These modes are as : two stretching vibrations ( one symmetric and one asymmetric) both belonging to a’ species, two angle deformations (scissoring and rocking), one out-of-plane wagging of NH 2 and one torsion vibration of NH 2 . There are three major differences between the C-H and N-H stretching frequencies. First, the force constant for N-H stretching is stronger, there is a larger dipole moment associated with the N-H bond, and finally, the N-H bond is usually involved in hydrogen bonding. The stronger force constant leads to a higher frequency for absorption. The N-H stretching frequency is usually observed from 3500-3200 cm-1. The larger dipole moment leads to a stronger absorption and the presence of hydrogen bonding has a definite influence on the band shape and frequency position. The NH 2 stretching modes appear in the region 3500 – 3100 cm −1 and the asymmetric component has slightly higher magnitude than the symmetric
component.
D.N.Singh
19
observed asymmetric modes at 3465 cm −1 and symmetric mode at 3360 cm −1 . However, A.K.Tiwari 20 observed them at 3449 cm −1 and 3367 cm −1 respectively.
He observed in-plane bending and rocking mode at 1630 cm −1 and 1055 cm −1 respectively. A.K.Tiwari19 got in-plane bending mode at 1621 cm −1 and rocking mode at 952 cm −1 . D.N.Singh 20 observed wagging vibration at 592 cm −1 and he didn’t got torsion mode. A.K.Tiwari19 observed these vibrations at 626 cm −1 and 274 cm −1 respectively. In present study we get frequencies for them as shown in table 3. COOH Group Modes In the parent molecule benzene if one of the hydrogen atom is replaced by a COOH group, nine more normal modes would appear. They are as:- O-H Stretching, C-O Stretching, C=O Stretching, in-plane-rocking, in-plane bending of C-O, in-plane-bending of C=O, inplane-bending of OH, out-of-plane wagging, and
out-of-plane torsion.. J. Antony et al13
studied vibrational spectra of benzoic acid and got C=O Stretching at 1745 cm −1 , C-O stretching at 1050 cm −1 , C-O in-plane bending at 594 cm −1 , C=O in-plane bending at 1804 cm −1 , OH stretch at 3785 cm −1 , rocking mode at 554 cm −1 , torsion mode at 594 cm −1 and wagging mode at 441 cm −1 . Florio et aI
15
observed C=O Stretching at 1752 cm −1 , C-O
stretching at 1347 cm −1 , C-O in-plane bending at 628 cm −1 , OH stretch at 3785 cm −1 , rocking mode at 628 cm −1 ,
and wagging mode at 160 cm −1 . In present study we get
frequencies as shown in table 4. CONCLUSIONS Theoretical semi-empirical quantum mechanical AM1 and GF matrix calculations of the geometry and vibrational frequencies of the Benzoic acid and its amino substitutents
are
presented in this paper and compared with infrared spectra. The calculated geometries and frequencies agree well with the experimental ones, but there are some differences between frequencies mainly due to intermolecular interactions, anharmonicity and computational basis set. ACKNOWLEDGEMENTS The authors are grateful to Director, Directorate of Technical Education-Madhya Pradesh, Bhopal and Head, Department of Physics, Dr. H.S.Gour University, Sagar (MP), India and
Central Drug Research Institute, Lucknow, India for IR spectra, Hypercube Inc for providing Hyperchem Package 7 for molecular modeling.
Table 1 Assumed Bond Length and Bond angle in Benzoic and Amino Benzoic Acids. Bond Angle ( Degree )
Bond
Bond length ( A 0 ) By DFT Experime Method 18 ntal
By MOPAC Calculation
Bond Angle
By DFT Method 18
O2 – H6
1.00
0.98
1.06
C7 O2 H6
110.27
C 7 – O1
1.230
1.26
1.19
O1 C 7 O 2
123.26
122.2
122.81
C7 – O2
1.323
1.27
1.21
O 2 C 7 C1
114.50
118.0
118.10
C 7 – C1
1.486
1.48
1.10
C1 C 7 O1
122.24
122.0
121.42
C1 – C 2
1.400
1.39
1.40
C 7 C1 C 2
121.40
118.0
121.53
C2 – C3
1.391
1.38
1.39
C 6 C1 C 7
119.90
119.9
119.96
C3 – C 4
1.395
1.37
1.40
C 6 C1 C 7
118.70
118.8
119.96
C 4 – C5
1.395
1.38
1.39
C1 C 2 C 3
119.86
120.1
120.00
C5 – C6
1.390
1.40
1.40
C2 C3C 4
120.02
119.9
119.98
C 6 – C1
1.400
1.39
1.39
C3C 4 C5
120.15
120.3
120.02
C 2 – H1
1.082
0.79
1.10
119.98
119.7
119.98
C3 – H2
1.084
0.96
1.10
C 4 C5C6 C5C6C7
120.02
119.8
119.99
C4 – H3
1.084
0.91
1.10
C1 C 2 H1
119.48
119
120.00
C5 – H 4
1.084
0.96
1.10
H1 C 2 C 3
120.66
121
120.00
1.083
0.79
1.10
C2 C3H2
119.85
120
119.99
1.103
1.10
1.11
120.07
119
120.00
1.154
1.12
1.13
H2 C3C 4
119.91
118
119.50
119.94
118
119.63
C6 – H5 C–N N-H
C3C 4 H3 H3C 4 C5
Experime ntal
By MOPAC Calculation 106.00
120.09
119
120.01
C3C5H 4
119.93
120
119.96
H 4 C5C6
121.12
121
121.23
C5C6H5
118.86
118
118.63
H 5 C 6 C1 CNH HNH
119.98
119
119.99
148.95
150
147.95
103
95.6
Table 2 Experimental and Calculated Frequencies and Potential Distribution in C 6 H 5 COOH Assignme G F Matrix Frequencies nt Experimental (in cm −1 ) Frequencies Frequencies PED and Mode AM1 −1 −1 (in cm ) (in cm ) 1 2 3 4 5 6 7 8
3507 3217 3130 3100 3087 2987 1823 1696
3579.2 3210.6 3118.8 3111.5 3072.4 3010.9 1716.5 1648.1
9 10
1585 1499
1561.4 1518.7
11 12 13 14 15 16 17 18 19
1456 1328 1228 1292 1280 1186 1179 1129 1074
1443.8 1311.5 1243.8 1312.3 1277.3 1171.4 1192.5 1134.6 1063.1
20 21 22 23 24
1029 1000 808 668 600
1011.1 1013.9 801.3 652.7 587.3
25 26 27
548 420 317
525.6 412.1 310.5
OH str CH str CH str CH str CH str CH str C=O str CC ring deformation C-C str COH bnding
3627.3 3188.2 3190.2 3102.2 3175.7 3172.0 1786.2 1921
CCH bending OH bending C-O str CCh bending O-H bend CH ib COH bending Ring id+C-O str Ring CCH bending Ring id + CC str CH od CH od OCO deform Ring CCC bending COH bending C-O bending C=O bending
1572.6 1441.9 1435.7 1378.9 1359.0 1314.7 1229.4 1198.3 1177.5
1765.5 1638.6
1168.0 1089.4 796.5 646.3 536.8 509.9 409.6 286.0
Assig nment
Experiment al Frequencies (in cm −1 )
28 29 30 31 32 33 34 35 36 37 38 39
980 970 935 850 812 709 664 613 591 190
G F Matrix Frequenci es (in cm −1 ) 971.6 967.3 929.5 937.6 844.1 801.9 719.8 657.1 609.3 593.4 199.4 57.6
PED and Mode
CC wagging CC wagging rocking CC wagging Ring CCH Ring CCH bend C=O o.p.bend Ring CCH bend torsion torsion wagging twisting
Frequencies (in cm −1 ) AM1
1013.2 995.6 971.8 894.5 886.3 825.9 723.6 610.2 611.9 571.92 150.6 44.0
Table 3 Internal Vibrations of NH 2 group Mode of Vibration
a’
a”
N-H Asymmetric Stretching CN-H Symmetric Stretching NH 2 In-Plane Bending NH 2 Rocking Wagging Torsion
o-Amino Benzoic Acid (in cm −1 ) 3622 (E), 3601.6(GF) 3530.9(M) 3325(E), 3342.9(GF) 3530.9(M) 1156(E), 1162.3(GF) 1219.5(M) 536(E), 527.1(GF) 558.1(M)
m-Amino Benzoic Acid (in cm −1 ) 3472(E), 3490.1(GF) 3492.4(M) 3225(E), 3207.6(GF) 3464.6(M) 1110(E), 1123.5(GF) 1217.7(M) 541(E), 531.3(GF) 537.2(M)
p-Amino Benzoic Acid (in cm −1 ) 3509(E), 3521.3(GF) 3512.2(M) 3462(E), 3487.2(GF) 3490.0(M) 1132(E), 1140.1(GF) 1143.9(M) 523(E), 529.3(GF) 539.3(M)
459(E), 441.8(GF) 440.5(M) 279(E), 284.7(GF) 281.7(M)
432(E), 441.8(GF) 497.4(M) 281(E), 280.2(GF) 251.2(M)
412(E), 408.3(GF) 380.2(M) 291(E), 300.1(GF) 326.0(M)
E :- Experimental frequencies GF:- Theoretical frequencies calculated by GF Matrix method M:- Theoretical frequencies calculated by MOPAC method
Table 4 Internal Vibrations of COOH group Mode of Vibration O-H Stretching a’ C-O Stretching C=O Stretching Bending C-O Bending C=O Bending OH
Rocking a” Wagging Torsion
Benzoic Acid (cm −1 ) 3389 (E) 3379.2(GF) 3427.3(M) 1823(E) 1818.1(GF) 1821.0(M) 1696(E) 1716.5(GF) 2076.2(M) 420(E) 412.1(GF) 409.6(M) 317(E) 310.5(GF) 200.0(M) 1328(E) 1343.8(GF) 1435.7(M)
o-Amino Benzoic Acid (cm −1 ) 3338(E) 3315.6(GF) 3427.8(M) 1856(E) 1846.3(GF) 1959.2(M) 1590(E) 1581.5(GF) 1549.9(M) 440(E) 421.5(GF) 414.5(M) 351(E) 362.4(GF) 259.5(M) 1360(E) 1358.9(GF) 1355.5(M)
m-Amino Benzoic Acid (cm −1 ) 3420(E) 3431.1(GF) 3427.5(M) 1845(E) 1863.2(GF) 2075.5(M) 1603(E) 1621.1(GF) 1551.2(M) 450(E) 431.3(GF) 437.2(M) 335(E) 338.2(GF) 334.3(M) 1310(E) 1321.6(GF) 1435.5(M)
p-Amino Benzoic Acid (cm −1 ) 3400(E) 3429.1(GF) 3431.7(M) 1793(E) 1728.2(GF) 1737.3(M) 1657(E) 1631.1(GF) 1600.7(M) 441(E) 411.2(GF) 416.4(M) 366(E) 371.1(GF) 377.5(M) 1337(E) 1332.3(GF) 1331.7(M)
664(E) 657.1(GF) 610.2(M) 288(E) 293.4(GF) 271.9(M) 709(E) 719.8(GF) 723.6(M)
601(E) 619.3(GF) 637.1(M) 293(E) 284.7(GF) 281.7(M) 758(E) 751.8(GF) 753.5(M)
650(E) 579.4(GF) 579.5(M) 293(E) 285.2(GF) 266.7(M) 789(E) 751.7(GF) 744.1(M)
692(E) 706.2(GF) 754.3(M) 291(E) 300.1(GF) 326.0(M) 768(E) 786.1(GF) 875.3(M)
E :- Experimental frequencies GF:- Theoretical frequencies calculated by GF Matrix method M:- Theoretical frequencies calculated by MOPAC method
REFRENCES 1. WWW.Chemicalland21.com, Nov.(2005). 2. Foye’s principle of medicinal Chemistry, 5th edition, Lippincott Williams and Wilkins, New York, (2002) 3. J.H.S.Green, W.kynaston and L.S.Lindsey, Spectrochim Acta A; 17, 486, (1961). 4. J.H.S.Green, D.J.Harrison, Spectrochim Acta ; 26A,1925, (1970). 5. J.H.S.Green , Spectrochim Acta ; 33A, 575, (1977). 6. Y. Kim and K.Machida, Spectrochim Acta, 42A, 8, 881, (1986) 7. A.Theoret, Spectrochim Acta A, 27, 11, (1971). 8. V.K.Rastogi, M.P.Rajpoot and S.N.Sharma; Ind. J. Phy; 58B, 311 (1984). 9. E.B.Wilson ,J C Decius and P C Cross, Molecular Vibrations, Mc Graw-Hill Book Co., (1955) 10. Win MOPAC- Molecular Orbital Program, Fujitsu Limited, (1997) 11. G. Keresztury and G. Jalsovsky, J. Mol. Structure, 304, (1971) 12. J.M. Bakker, G. Meyer, M. Kabelac and M.S. de Vries, Phy Chem Chem Phys, 6, 2810, (2004). 13. J. Antony, G.V.Helden, G. Meijer and B. Achmidt, J. of Chemical Physics,122, (2005). 14. G.M. Florio, E.L. Sibert and T.S. Zwier; Faraday Discuss, 118, 315, (2001). 15. G.M.Florio, T.S.Zweir and E.L.Sibert, J. Chem. Phys; 118, 1735, (2003). 16. K.C.Light and T. Carrington; Adv. Chem. Phys; 114, 263, (2000). 17. R.Glaser, J. Org. Chem; 66, 771, (2001). 18. M.J. Wojick, K.Szczepenek and M. Boczar, Int. J. Mol. Sci; 4, 422, (2003). 19. D.N.Singh, Ph.D. Thesis, Banaras Hindu University, Banaras, India, (1980). 20. A.K.Tiwari, Ph.D.Thesis, Dr. H.S.Gaur University,Sagar, India (2004).
.